Idiomarina loihiensis GSL 199: K734_12835
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Entry
K734_12835 CDS
T02681
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ili
Idiomarina loihiensis GSL 199
Pathway
ili03420
Nucleotide excision repair
ili03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ili00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K734_12835 (uvrD)
03430 Mismatch repair
K734_12835 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ili03400
]
K734_12835 (uvrD)
Enzymes [BR:
ili01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K734_12835 (uvrD)
DNA repair and recombination proteins [BR:
ili03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K734_12835 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K734_12835 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF4391
AAA_22
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGM37426
LinkDB
All DBs
Position
complement(2734995..2737166)
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AA seq
723 aa
AA seq
DB search
MSTHPLLADLNERQQQAVSATDGHMLVLAGAGSGKTRVLVHRIAWLIQERQYSPFSILAV
TFTNKAAAEMRGRVEQLVGSSVRGMWIGTFHGLAHRLLRAHYMDVGLPQNFQIIDSDDQQ
RLIKRLIKSLNLDDKRWPAKQAQWYINGKKDEGLRPQHIETYDPTEQTLKEIYTLYQESC
DRAGLVDFAELLLRAHELLRNNRIVREHYQNRFRHILVDEFQDTNSIQYAWIRLLAGSQN
SVTIVGDDDQSIYGWRGAKVENIHQFLSDFEGSETIRLEQNYRSTSTILRAANSVISNNS
GRLGKDLWTDGNDGEPISLYAGFNEMDEARYIVARIEEWRDQGGSLQDSAILYRSNAQSR
ILEEALLHARVPYRIYGGLRFFDRQEIKDALAYLRILGNRDDDAAIERVINTPTRGIGNR
TMDMIRQAAREREESLWQAAKYMVNEKQLAGRARNAVGSFLDFIENLDDETEEFSLGRLS
DEVIKKSGLMAMYEAEKGEKAETRVENLKELVTACENFTLDDDEEDMTPLNAFLAHASLE
AGEEQADEYQDAVQLMTLHSAKGLEFPLVFMTGVEEGLFPSQQSMDEPGRLEEERRLCYV
GMTRAMEKLVLTYAEQRRIYGQELFHKVSRFISEIPADTLHEVRLQTRVEKPASYGRFNN
AASHESFEQTGYSLGQRVRHPKFGEGTVLNYEGTGPQSRIQINFDNVGSKWLVVAYARLD
PVF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacacccgcttctggcagatttaaacgaacgacagcagcaggccgtatctgca
accgacggtcacatgctggttctggccggagccggtagtggtaaaacccgtgtgttggtg
caccgcattgcctggcttattcaggagcggcagtattcgccctttagtattctggctgtt
acctttaccaataaagcggcagccgaaatgcgcggacgggttgagcaactggtaggcagc
tcggtacgtggtatgtggattggtaccttccatggtctggcgcatcgcttattgcgtgcg
cattatatggacgttggtctgccgcaaaactttcagataattgacagtgatgaccagcaa
cggttaattaagcgtttaattaaaagcttaaacctggatgataaacgctggccggcaaag
caggcgcagtggtacatcaatggtaaaaaagacgaaggtctgcgcccgcagcacattgaa
acctacgatcctacagagcaaaccttaaaagaaatctacactttgtatcaggaaagctgt
gaccgtgcaggcctggtggattttgccgaattgctgctgcgtgcgcacgagttactgcgg
aataaccgcattgtccgcgagcattatcaaaaccgcttccgccatattctagtcgacgag
tttcaggacaccaactcaatccagtatgcctggatccgtttattggctggcagccagaac
agtgtgaccattgttggtgacgatgaccagtccatttatggctggcgtggtgccaaagtc
gagaatattcatcagtttctatcggattttgaaggctctgagactatccgtctggagcag
aactatcgctctacaagcaccattttgcgcgccgcaaactcggttatttccaataactcg
gggcgtctgggtaaagacttatggacagacggtaacgacggcgagccgataagcctgtat
gcgggcttcaatgaaatggacgaagcccgttatattgtagcacgaattgaagaatggcgt
gatcagggcggttcgctgcaagactccgccattttataccgaagtaacgcacaatcacgt
attttagaggaagcgttgctgcatgcgcgcgtcccgtatcgtatttatggcggcttgcgt
ttcttcgaccgccaggaaataaaagacgcactagcgtacttgcgaattctcggcaaccgc
gacgatgacgccgctatcgagcgggtgatcaatacgccgacgcggggcattggtaatcgt
actatggatatgatccgccaggctgcccgagaacgtgaagagtctttatggcaggcggca
aaatatatggtcaatgaaaagcagttggccgggcgtgcgcgtaacgcggtgggttcgttt
ctggattttatcgagaacttagacgacgaaaccgaagagttttcattaggccgcctgagt
gacgaagtcattaagaaaagcggtctgatggccatgtacgaggccgaaaaaggcgaaaaa
gcggaaacccgggtcgagaacttaaaagagctggtgactgcctgtgaaaacttcactctg
gatgacgacgaagaagacatgacaccgctgaatgcgtttttagcacacgcttcgcttgaa
gctggtgaagagcaggccgatgaatatcaggatgccgtacagctcatgacactgcacagt
gcgaaaggtctggagtttccattagtatttatgaccggtgtggaagagggcctgttcccg
tctcagcaatcgatggatgagcccggaaggctggaagaagagcgccgcctttgctacgta
ggtatgacccgcgcaatggaaaagttagtgcttacttatgccgaacagcgccgtatttac
ggtcaggaactgtttcataaagtcagtcgctttatcagtgaaataccggcggacactctg
catgaagttcggctgcaaacccgggtagaaaagcccgccagttatggccggttcaataac
gcagccagccacgaaagctttgagcaaacgggttattcattaggccaacgcgtgcgccac
ccgaagtttggcgaaggtacggtgttgaattatgaaggtaccggtccgcaatccagaatt
cagattaacttcgacaatgtcggcagcaagtggctggttgttgcttatgcacgactggat
ccggttttctaa
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