Idiomarina loihiensis L2TR: IL0438
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Entry
IL0438 CDS
T00218
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo00470
D-Amino acid metabolism
ilo00550
Peptidoglycan biosynthesis
ilo01100
Metabolic pathways
ilo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IL0438 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IL0438 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IL0438 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ilo01011
]
IL0438 (ddlB)
Enzymes [BR:
ilo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IL0438 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ilo01011
]
Precursor biosynthesis
Amino acid ligase
IL0438 (ddlB)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp
ATP-grasp_3
CPSase_L_D2
GARS_A
ATPgrasp_ST
DUF8735
Motif
Other DBs
NCBI-ProteinID:
AAV81281
UniProt:
Q5R0N1
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All DBs
Position
453925..454854
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AA seq
309 aa
AA seq
DB search
MKANAFGKVAVMLGGTSAERDVSLKSGMAVLKGLVAKGIDAHAFDPAAHSLQELVEQKFD
RVFIALHGRGGEDGSMQGALQILEMPYTGSDVLGCALGMDKVRCKQIWHSVGLPTANWRV
VTQAEIEQVNVEAMLQELGGRVIVKPAREGSSIGMSIADNGRSLALALQHAAEFDDDLLV
EQWVEGAEYTIGILEGKALPVIRLQTPHEFYDFEAKYQANDTQYHCPAGLSDDDEASLRT
LAERAFAAIGGSGWGRIDVMRNNAGEWFLLEANTVPGMTEKSLVPMAAKVAGLQFNDLVE
RILAQTLER
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctaatgcctttggtaaagtggccgtcatgctgggcggtacgtcggctgagcgc
gatgtttcgctgaaatccggaatggcggtattaaaaggcttggttgcgaaaggcatcgat
gcacacgcatttgacccggcggcgcatagcttgcaggagcttgtggagcaaaagtttgat
cgcgtatttatcgctttgcatggccgcggcggtgaagatggcagcatgcagggggcgttg
caaatactggaaatgccatacaccggcagtgatgttctgggctgtgcgctgggtatggat
aaagtgcgttgtaaacaaatttggcattcagtgggtctgccaaccgccaattggcgggtg
gtaacgcaagctgaaatagagcaagtgaacgtggaagctatgttgcaggagctcggtggc
cgggtgattgtaaaaccagcacgtgaaggctcctctataggtatgagcattgccgataac
gggcgaagcctggctttagccttgcagcatgcggctgagtttgacgacgaccttttggtc
gaacagtgggttgaaggtgcggaatataccattggcatactggaaggtaaggcattaccg
gttattcgactgcaaacgccacatgagttttatgattttgaagctaagtatcaggcaaat
gatacccagtatcactgccctgcagggctaagtgacgatgacgaagcaagtttgcgaacc
ttggctgaacgcgctttcgcggccataggaggtagtggctggggacgcatcgatgtgatg
cgcaataacgcgggtgagtggtttttgttagaggccaatacggtaccgggaatgacagaa
aaaagcctggtacctatggcggcaaaagttgctggtttacagtttaatgacttagtggag
cgcattttagcgcaaacgctggagcgctaa
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