Idiomarina loihiensis L2TR: IL0523
Help
Entry
IL0523 CDS
T00218
Symbol
nhaR
Name
(GenBank) Possible transcriptional activator of LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ilo03000
]
IL0523 (nhaR)
Transcription factors [BR:
ilo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IL0523 (nhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Mga
HRXXH
HTH_11
HTH_5
MarR_2
MarR
SBP_bac_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AAV81365
UniProt:
Q5R079
LinkDB
All DBs
Position
complement(549011..549877)
Genome browser
AA seq
288 aa
AA seq
DB search
MNYKHLYYFWHVAENGHLTQTAQKLHVSQSALSAQIKQLEEWLGTPLFERTGRKLVLTQA
GYIARQYADRIFHEGENLVNQLKQGMDGSDLVVRIGHASTMSRNFVEAFIHELVHQQDVQ
YRLHSMTPDQLFNELADHQIDIALANTSVRGSDKQLWQSRLLARQPVSVIGPPGRDIEQL
TDVALRNNNWVLPPENMPLRAAFDMLSAEYNWQPRVLAEADDMAMLRLLARDTGALAVIP
DVVVRDELTSGQLKRYLTLPNVFEHFYAITLKRPFEHPMVAKLLQRFV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaattataagcacctttattacttttggcacgtggcagaaaacgggcatttaacccaa
accgcgcaaaagcttcatgtgtcgcagtcggcgttgtcggcgcagataaaacaactggaa
gagtggctgggtacgccgctgtttgagcgcacagggcgtaagttggtactgactcaggcc
ggatacattgcgcgccagtatgccgaccgaatttttcacgaaggtgagaacctggttaac
cagctaaagcaaggcatggacggcagtgatttggttgtgcgcattggtcatgcctcgact
atgtcgcgtaactttgtggaagcttttattcacgagctggtgcatcagcaggacgttcag
taccggctgcattctatgacgccggatcagttatttaatgagctggcggatcatcaaatt
gatattgcgctggccaataccagtgtgcgcggcagcgacaagcaattgtggcagagccgt
ttactggcgaggcagccggtgtctgttattgggccaccgggtcgtgacattgagcagtta
accgatgtggctttgcgcaataataactgggtgttaccgccggaaaatatgccgctgcgg
gcggcgttcgatatgctcagtgcggaatacaactggcaaccgcgggtgctggccgaggcc
gacgatatggcgatgctgcggctgttagccagggataccggcgcgctggcggtgattccg
gacgttgtggttcgggacgagttgaccagcgggcaattgaaacgctatttaactctgccc
aatgtgttcgagcatttttacgccataaccctgaagcgcccattcgaacaccccatggtc
gccaagctgctgcaacggtttgtttaa
DBGET
integrated database retrieval system
