Idiomarina loihiensis L2TR: IL0655
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Entry
IL0655 CDS
T00218
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IL0655 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ilo03400
]
IL0655 (alkA)
Enzymes [BR:
ilo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
IL0655 (alkA)
DNA repair and recombination proteins [BR:
ilo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IL0655 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
BRCA2
Motif
Other DBs
NCBI-ProteinID:
AAV81496
UniProt:
Q5R0A4
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All DBs
Position
complement(712737..713330)
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AA seq
197 aa
AA seq
DB search
MKTTPAIVRQHLIDTQPGIDLLLLQLPERGLLAASETPVIEALPRIIIRQMLSLKASATI
IERAEQKAKALGVGRIAYIPAEELTGCGVSRSKAAAINSVAHCHQTQPERIDAWSQMNSA
DLIKDVTQLKGIGPWTASILAMFHFAHEDLFPIQDSSLRKAMSLLKDQDILIIPERAQPY
RSYLACYLWDMLDQARL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgacaccagcaatcgtcagacaacaccttatcgatactcagccgggtatcgac
ttgttgctgcttcagttgcccgagcgaggcttattggcggcatctgaaacacccgttatc
gaggcactgccacgaattattattcgtcaaatgctgtctttaaaagcctccgcaaccatt
attgaaagagcagagcaaaaggcaaaagcattaggagtaggtcgcattgcttatattcct
gcggaggaattaacagggtgcggtgtcagtcgttccaaagctgcagctattaacagcgtt
gctcactgtcatcaaactcagcctgagagaatagatgcctggtcgcagatgaattcagct
gacctgattaaggatgtgactcagcttaaaggtattggtccctggacggcgtctatttta
gctatgtttcattttgcccatgaagatctttttcccattcaggatagctcgctgcgtaaa
gccatgagcctgctgaaagaccaggatattttgatcatccccgaacgggctcagccttac
cgcagttatttagcctgctatttgtgggacatgctggatcaggcacgtctgtag
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