Idiomarina loihiensis L2TR: IL0969
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Entry
IL0969 CDS
T00218
Symbol
nusA
Name
(GenBank) Transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ilo03021
]
IL0969 (nusA)
03009 Ribosome biogenesis [BR:
ilo03009
]
IL0969 (nusA)
Transcription machinery [BR:
ilo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IL0969 (nusA)
Ribosome biogenesis [BR:
ilo03009
]
Prokaryotic type
rRNA transcription factors
IL0969 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
DUF4332
KH_NusA_C
KH_2
KH_KhpA-B
PipX
Motif
Other DBs
NCBI-ProteinID:
AAV81809
UniProt:
Q5QTY7
LinkDB
All DBs
Position
complement(1023927..1025426)
Genome browser
AA seq
499 aa
AA seq
DB search
MSKEILLVAEAVSNEKAVPREKIFEALESALAHATKKKYDGDIEVRIDIDRTTGEFDTFR
RWLVVEDTDSGLEHPYREISLSAAQYEDPSVQAGDYVEEQIDSIQFDRITTQTAKQVIVQ
KVREAERAQVVDEYREQVGEMVSGIVKRANREHVILDLGNNAEAIIYRDEMLPRESVRPG
DRIRGLLYDVRPEARGAQLFVSRTNPNFLLELFRIEVPEIGEEMIELRGAARDPGSRAKI
AVKSNDKRIDPVGACVGMRGARVQAVSGELGGERVDIVLWDDNPAQYVINAMAPAEVASI
VVDEDAHTMDIAVAADNLAQAIGKGGQNVRLASQLTGWTLNVMTEDEFNEKNEAETQRLL
NLFVSTLDIDEDFANVLVDEGFSSLEEVAYVPVAEFLDIEGMDEDIVEELRSRARAYLTT
KALATEESLESAEPDDTLLNLEGMERHLAYVLASKGVTTLEELAEQGVDDLADIEELNEQ
QAGDLIMKARNICWFNEEQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaatactgttagtcgcagaagcggtttcaaacgaaaaagcagtaccacgc
gaaaaaatatttgaagcgttagagtcagcattggctcatgcgaccaaaaagaagtacgac
ggcgatattgaagttcgtattgatatcgatcgtaccactggcgaatttgatacattccgt
cgttggttagtcgttgaagacacggattctggattagaacatccttaccgtgaaataagc
ttgtcggcagcgcaatacgaagatccatcggtacaggccggtgactacgtagaagagcaa
atcgattcgatacagttcgaccgtattacgacccagactgcaaaacaagttatcgtacaa
aaagtacgtgaagccgaacgagctcaggttgttgatgaataccgtgagcaagtgggtgaa
atggtcagcggtattgttaagcgtgcgaatcgggagcacgttattctggatttaggtaat
aacgcggaagcgattatttatcgtgacgaaatgttaccgcgtgaatctgtgcgtccaggt
gatcgcattcgcggtttgctctatgacgttcgtccagaagctcgtggtgcacaattattt
gtaagcagaaccaatcctaacttcttgttggaattgttccgtatcgaggtgcctgaaata
ggcgaagagatgattgagctacgcggtgctgcccgagacccgggttcgcgtgctaaaatt
gcggttaagagtaacgataagcgtatagaccctgttggggcttgcgttggtatgcgcggt
gcacgagttcaggcggtatccggtgagcttggtggcgagcgcgtagacattgtgctttgg
gatgataacccggcacagtacgtcattaacgcgatggcgcctgctgaagtagcgtctata
gttgtggatgaagatgcacatactatggatattgcggttgcggcagataacctggctcaa
gctattggtaaaggtggacagaacgttcgcctggccagtcagctaaccggctggacactg
aatgttatgaccgaagacgagttcaacgaaaaaaatgaagctgaaactcagcgtctattg
aacttgttcgtatcgactttagatatcgatgaagattttgccaatgtactggttgatgaa
ggcttctcttcacttgaagaagtggcttatgtcccggttgcagaattccttgatattgaa
gggatggacgaagatatcgtagaagaattgcgtagcagagcacgtgcttatttaaccacg
aaagctctggctaccgaagaatctctggaatcggctgaaccagatgacacactgttgaac
cttgaaggaatggagcgtcacctggcttatgtattagccagcaaaggcgtgacaactctg
gaagagttagcggaacagggtgttgacgacttagccgatattgaagaattaaatgaacag
caggctggcgatttaattatgaaagctcgcaatatttgctggttcaatgaagaacagtag
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integrated database retrieval system
