KEGG   Idiomarina loihiensis L2TR: IL1018
Entry
IL1018            CDS       T00218                                 
Symbol
fimV
Name
(GenBank) Probable Tfp pilus assembly protein FimV, contains LysM domain
  KO
K08086  pilus assembly protein FimV
Organism
ilo  Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:ilo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ilo02044]
    IL1018 (fimV)
Secretion system [BR:ilo02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   IL1018 (fimV)
SSDB
Motif
Pfam: TPR_19 Tweety TPR_6 TPR_4 TPR_14 LysM TPR_8 DUF3906
Other DBs
NCBI-ProteinID: AAV81858
UniProt: Q5QUE4
LinkDB
Position
complement(1087317..1089665)
AA seq 782 aa
MRKTKIVQVLRYFSLAAMVLSGSMTVAAAGWQDGVVIKGEKGSEATDVRIGQERYGPISS
NDTLWDIARRYKPHSSVTQYQTMVAIVQANDDAFVDGNMNRMLNGFYLRIPSLQEIKMVN
PEAARRQVVVDSQLKTKSQQLSQARQDTQKTRAEQQELLEQAREKAEQTIQEVEQRQEQN
FQELRSDMQQSMQAVERMYEENKSLQERIDALASRLDELANNVSKTDELEVQFQQVLAQQ
RELLEQQAREELEQESGFSDWLQSPLNMLLVSVLPALLIIGLIVFFFLRRSAKPVEEDEE
AEEKSSKELTEEEAAAELDKELLGDVPNDSTDGLFDIDGEESTDDEGDDLSALEAELTGN
SDEPEAADLSVRLDDGKDDARKEEPKPEAETEPAVEDDLDDDDQAVLPDEEDEESSELSQ
DELDRLFGEADDDDEQAIDLSVTDEEESPESSSADADEPVSENIEQEGEATEEESAVADV
DDIDDILSDNAPSETPEEADSDDERAVDDKPDKGETDSDQESDDLLPDDFDDSEVDDVLA
ELGLAENEADEPESEKAESIETDSSEAEDEPEADEAQSEEAAEAEETELTSQEESQPVEE
DSEEDNLEQLLQESDELTQSLDDLEEEVPDDDAELDKAEDEADKDLESLFGGSDNADNIV
DEDEPATEENDTESEAETDAFSATDDDEFVDIDSLMADADEEDEDSDRYQSSAVKDVLPD
DESGDAEGAPQDDEPSGQLDLARAYIEMGEEDEAREILQQLAEGDDEALANEAKTLQQKL
DS
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgagaaaaaccaagatagtgcaggtactgagatacttctcgctggcagccatggtgttg
tccggcagcatgactgtcgctgctgcaggctggcaggatggcgtcgttataaaaggcgag
aaaggctcagaagcaaccgatgttcgtatcggccaggagcgctatgggcctataagcagc
aacgacaccttgtgggatattgcgcggcgttataagccacactccagtgtgacccagtat
cagactatggttgctattgtgcaggctaatgacgatgccttcgtcgatggtaatatgaac
cgcatgctcaatggtttttacctgcgcattccctctttgcaagaaatcaaaatggttaac
cccgaagccgctcgtcggcaagtcgtggtagatagccaattaaaaaccaagtctcaacaa
ctctcgcaagctcggcaggacactcagaaaactcgcgcggaacagcaggagttacttgag
caggcccgggagaaagctgaacaaaccattcaggaagttgaacagcgacaggaacaaaac
tttcaggagttgcgctctgatatgcagcagtccatgcaggcggttgagcgcatgtatgaa
gagaataagtctctgcaggagcgtatcgacgcattagcgtcgcgtttagatgagcttgcc
aataatgtgagcaaaaccgatgaactggaagttcagtttcaacaggtattagctcaacaa
cgggagctgcttgaacagcaggctagagaagagctggagcaggagtccgggttttccgac
tggttgcaaagtcctttgaatatgttgcttgtatcagtattaccggcactgcttattatc
ggtcttattgtgtttttctttttgcgccgttcagccaaaccggtagaggaagatgaagag
gcggaagaaaagagcagtaaagagcttactgaagaagaagccgccgctgaactcgataaa
gaactgctgggagatgtacctaacgacagtacagatggcttattcgatattgatggtgaa
gaaagcactgatgacgaaggtgacgacttaagtgcgctagaggctgagttaaccggaaat
tcggatgagccggaagccgctgatttgagcgttcgtcttgacgatggaaaagacgatgcc
aggaaggaagaaccgaagccggaagccgaaactgaaccggctgtagaagacgatttagac
gacgatgatcaggctgtattgccggatgaagaagacgaagagtctagtgaattgtctcag
gatgaactggatcgtttatttggcgaagccgacgatgatgatgaacaggcgattgacctt
tccgtcactgatgaagaagagtctccggagtcatcgagtgcagatgctgatgaacctgtt
tcagaaaatattgagcaagaaggtgaagcaacagaagaagagtctgcagtagctgacgtc
gatgatatcgatgacattttgtccgacaacgcgccttcagaaactcctgaagaagctgac
agcgacgatgagcgtgcagttgatgataagcctgacaaaggcgaaactgattcagaccag
gaaagtgacgacttgttgccggatgactttgacgacagcgaggttgatgatgttctcgct
gagttgggtcttgcggaaaacgaagccgatgagccggaaagtgagaaagcggaaagcata
gaaaccgacagctccgaagccgaagatgaaccagaagctgatgaggctcaatcagaagag
gctgccgaagcggaagaaaccgagctaacctcgcaggaggaaagccagcctgtagaagaa
gactccgaagaagataatctggaacagttgctgcaagagtcggatgagttgactcagtca
ctggatgaccttgaagaagaagttcccgacgacgatgcggaacttgataaggcagaagat
gaagcggacaaagacttagagtcgctatttggtggttccgataatgcggataatattgtc
gatgaagatgagccggctacagaagaaaacgacaccgaaagcgaagccgaaactgatgca
tttagcgctaccgacgacgatgaatttgtggatattgactccttaatggcggatgccgat
gaggaagacgaagacagtgatcgctatcagtcgtcggcagtaaaagacgttttaccggat
gatgaatctggagatgccgaaggggctccacaagatgatgaaccgtcgggtcagcttgat
cttgccagagcctatattgaaatgggcgaagaggacgaagctcgggagattcttcagcaa
ttagcagaaggtgatgatgaagcgctggcaaatgaagctaagacgctgcaacagaaacta
gattcgtag

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