Idiomarina loihiensis L2TR: IL1183
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Entry
IL1183 CDS
T00218
Symbol
sfhB
Name
(GenBank) Pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ilo03009
]
IL1183 (sfhB)
Enzymes [BR:
ilo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
IL1183 (sfhB)
Ribosome biogenesis [BR:
ilo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IL1183 (sfhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TTC3_9th
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AAV82023
UniProt:
Q5QTU5
LinkDB
All DBs
Position
complement(1272857..1273825)
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AA seq
322 aa
AA seq
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MNKSIELEAIVTESLAGKRLDQALAELFPDYSRSRLKSWITDGKVTIDTKVIEKPREKVV
AGALVAVDAEIEGEERHAAQPVELDIVYEDDDILVINKPAGLVVHPGAGAPDRTLLNGLL
HYDPQLDLVPRAGIIHRLDKDTTGLMVVARNVPAQTQLVSMMQDRDITREYEAVCNGVMT
AGGMVDQPIGRHPTKRTHMAVVQSGKPAVTHYRVLDRYRAHTLLRLRLESGRTHQIRVHM
AHIRHPLVGDLTYGGRPRPPKQAEDRLLQTLRGFNRQALHAASLGLHHPITGDWLEFNVP
RPTDFQYLIEELRVDHERFKSA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagcattgaattagaagccattgttaccgagtctctggctggaaaaagatta
gaccaggcacttgcagagttgttccctgactactcaaggtctcgcttaaaaagctggata
actgatggaaaagtgaccattgatacaaaagtcatcgaaaaaccgcgagaaaaagtggtc
gccggtgctttagttgcagtggacgcagaaattgaaggggaagagcggcacgcagcacag
ccggtggaactggatattgtttatgaagatgacgatattctggttattaataagcctgcg
ggcttagttgtccatcccggagcaggagcgcctgacagaaccttgctgaacggtttgttg
cattatgatccgcagctcgatttagtgccgcgggcgggtattattcaccgtttagataaa
gacacaacaggactgatggttgttgcgcgtaatgtgcccgcacagacgcagttagtctca
atgatgcaggatcgcgatattactcgcgaatatgaagcagtgtgtaatggtgtgatgaca
gccggcggcatggttgaccaacctatcggtcgtcatccgacaaaacgtacgcatatggcg
gtggtgcagtcggggaaaccggcagtcacgcattatcgtgtgttagatcgctaccgtgcg
catacattacttcgtctgcgtttagagtccggccgaactcaccagattcgcgtgcatatg
gcgcatattcgccaccccttagtcggtgacttgacctacggcggccgaccgcgtccgccc
aaacaggctgaagatcgtttattgcagacgttgcgagggtttaaccgccaggcgctgcat
gcggcatcgttgggcttacatcatcccattaccggcgactggctggagtttaatgttcca
cggccaaccgattttcaatatttaattgaagaactgcgcgttgatcatgaacgtttcaag
tcagcatga
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