Idiomarina loihiensis L2TR: IL1204
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Entry
IL1204 CDS
T00218
Symbol
hyfR
Name
(GenBank) Probable response regulator of flagellar motility
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo02020
Two-component system
ilo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IL1204 (hyfR)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IL1204 (hyfR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ilo03000
]
IL1204 (hyfR)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ilo02035
]
IL1204 (hyfR)
Transcription factors [BR:
ilo03000
]
Prokaryotic type
Helix-turn-helix
Other families
IL1204 (hyfR)
Bacterial motility proteins [BR:
ilo02035
]
Flagellar system
Flagellar assembly proteins
Others
IL1204 (hyfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
Pre_tape_measure
TIP49
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AAV82044
UniProt:
Q5QUH7
LinkDB
All DBs
Position
complement(1292493..1293929)
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AA seq
478 aa
AA seq
DB search
MTKTRIVYLVEQQPERRQHFETVLTFIGETVEVISPSDTLKLCAADALCVIAGNGIENLH
KLAGDAPHLPFICATDDQSNALQKANVIGPLEKSFDYSSLSNMLHYCQAYHQQMPAKAAR
KRHPGGGKLEQTLVGNGRTMKHVRQLIEQVAVTDANVLILGESGTGKEVVARGIHDLSGR
SNGPFVPVNCGAIPGDLLESELFGHEKGAFTGAIGARKGRFELAQGGTLFLDEIGDMPLP
MQVKLLRVLQERTFERVGGSKSIIADVRVVAATHRELEQMIIDGKFREDLYYRLNVFPIE
VPALRERQEDVPLLLQELTQRFKKERGVGVRFTERALESLSYHRWPGNVRELTNLIERLT
IMHPDSLVDVPDLPPKYQHVEHDAPTPDYPEEMLEREALSAIFSESEEELDDETNSAIDS
ELPDDGVNLKDMLTEIETGMIAQALAKSDWVVAKAADLLSMRRTTLVEKMKKYGIQKD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaagaatagtctacctggttgaacagcagccagagcgtcgtcagcatttt
gaaacggtattaacctttattggtgaaaccgttgaagtcatatctccttcagacactcta
aagctttgtgctgccgatgcgctctgtgtgattgccggtaatggtatcgagaatctgcat
aaattagccggcgatgcgccgcacctgccttttatttgtgctactgacgaccagagtaac
gctttacagaaagcgaatgtcataggtcctctggaaaagtctttcgattactccagcttg
tcgaacatgctgcattactgtcaggcttaccaccagcaaatgccggctaaagcggcaaga
aagcggcatccgggcggtggtaaactggagcaaaccttagttggtaacggccgtacaatg
aaacatgtacgtcagctgatagagcaggtagctgtgaccgacgcgaatgtcctgattctg
ggtgaatccggaacgggtaaagaagttgtggcccgcggtattcatgatttgtcaggtcgc
agtaatggaccctttgtgccggtaaattgcggtgcaattccgggcgacttgttagaaagt
gagttgttcgggcatgaaaaaggcgcttttaccggtgccataggtgcgcgcaaaggtcgt
tttgaactggctcagggtggcaccttgtttctggatgaaataggcgatatgccattgccc
atgcaggtaaaactgttgcgagttttacaagagcgcaccttcgaacgcgtggggggtagt
aaaagtattattgccgatgtacgagtggtggcggcgactcaccgcgagctggaacagatg
atcattgacggcaaattccgtgaagatttgtattaccgtttaaacgttttccctattgaa
gttccggctctgcgcgaacgtcaggaagacgtgcctttgctgctgcaggaactgacccag
cgttttaaaaaagaacggggcgttggggtgcgttttactgagcgagctttagagtcgttg
tcttatcatcgctggccgggcaatgtaagagagttgactaacctgatagaacgtttgacc
attatgcaccccgacagcctggttgacgtgcccgatttaccgcctaagtatcagcatgtg
gagcacgatgcaccaaccccggattaccctgaagaaatgctggagcgtgaggcgctgagt
gcgattttcagcgagtcagaggaagaacttgatgacgagacgaatagtgctattgactct
gaattgcccgatgacggcgttaatctgaaagatatgctaaccgaaatagaaacggggatg
atagctcaggcattagccaaatctgactgggtcgttgctaaagcggccgatttactcagt
atgcgccgcacaaccttagttgagaaaatgaaaaagtacggtatccagaaagattaa
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