Idiomarina loihiensis L2TR: IL1309
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Entry
IL1309 CDS
T00218
Name
(GenBank) RNA pseudouridylate synthase-family protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ilo03009
]
IL1309
Enzymes [BR:
ilo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
IL1309
Ribosome biogenesis [BR:
ilo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IL1309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AAV82149
UniProt:
Q5QYZ8
LinkDB
All DBs
Position
1406359..1406934
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AA seq
191 aa
AA seq
DB search
MKSQTKRPANPKLVLLNKPYGVLSQFTGEEGDQTLKPFIPHNDVYPAGRLDKDSEGLLLL
TNDGVYQARLANPKYKVWKTYWVQVEGDPSEEQLEQLRNGVELNDGMTRPAEAFVMPEPM
NLWPRNPPVRERKSVPDSWLCLKIREGKNRQVRRMTAHVGLPTLRLIRAAVGPFQLKTMQ
PGEWRSEPPVW
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgcagacaaaacgaccggcaaaccccaagttggttttactgaacaagccttac
ggcgttttatctcagtttaccggagaagaaggcgaccagactttaaagccgttcattccc
cataacgacgtttaccccgccggacgtcttgataaagacagcgaagggttgttgttgcta
accaatgacggcgtttatcaggctcgccttgctaaccctaagtacaaagtctggaaaacc
tattgggtgcaggtagaaggtgacccaagcgaagagcagttagagcaattaaggaacggt
gtcgagttaaacgacggaatgacccgcccagctgaagccttcgttatgcctgaaccaatg
aatttatggccacgaaaccctcccgttcgtgagcgcaaaagcgttcctgacagctggctt
tgccttaaaattcgcgaaggcaaaaaccgccaggttcgccgtatgacagcacatgttggg
ttacctacccttcgcctgatacgggccgctgtgggtccttttcagttaaaaacaatgcag
cccggcgaatggcgttcagaaccaccagtttggtaa
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