Idiomarina loihiensis L2TR: IL1348
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Entry
IL1348 CDS
T00218
Name
(GenBank) Predicted pseudouridylate synthase, Rlu family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ilo03009
]
IL1348
Enzymes [BR:
ilo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
IL1348
Ribosome biogenesis [BR:
ilo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IL1348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAV82188
UniProt:
Q5QZ45
LinkDB
All DBs
Position
complement(1446413..1447360)
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AA seq
315 aa
AA seq
DB search
MKTIQQEVRWHTVSAEESGQRIDNFLIAQLRGVPKSLVYRIVRKGEVRANKKRIKPDYKL
KEGDLIRIPPVKVNERPDLPSANLEQVAALEHAILYEDDALMLINKPSGVAVHGGSGLQF
GLIEGLRALRPKEKSLELVHRIDRDTSGLLLVAKKRSVLRSLHEQLRNKEMNKQYLALVR
GQWQKRVRSVEAPLKKNTLKSGERIVRVDAEGKASLTRFRIQQRYKEGTLVEASPVTGRT
HQIRVHALHAGHPIAKDPKYGDTDFDNTMSRLGLNRLFLHAWQLRFLHPVTGKEVAFEAP
LDDNLQQTLKQLTAQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaattcaacaagaagtacgctggcatactgtctctgcagaagagtcagggcag
cgaatagataactttctcattgcgcaattacgcggtgtacctaagtctttggtgtaccga
attgttcgtaaaggtgaagtgcgggcgaataaaaagcggataaaaccggactataagtta
aaggaaggtgacctcattcgcattcctccggtaaaagtgaacgaaaggcctgaccttccg
tctgctaatttagagcaggttgcagctctggagcacgcgatcctctatgaagatgacgct
ttgatgttaattaataaaccatcaggagtcgccgtacatggcggctccgggttgcagttc
ggtcttattgaaggcttaagagcgctgcggccaaaagagaaaagcttagagctggttcac
cgaatagatcgcgacaccagtggcttgttgctggttgctaaaaaacgttcagtgctgaga
agtttgcatgaacagttgcgtaacaaagaaatgaataagcaatatctggcgttggttcgt
ggtcaatggcaaaaacgggttcgcagtgttgaggcgccgttaaaaaagaacaccttaaaa
tccggcgagagaattgtacgcgttgatgcagaaggcaaagcctctttgactcgtttcaga
attcagcaaagatataaggaagggacattagttgaagcgtcgccagttaccggccgcacc
catcaaattcgtgttcacgcgttacacgccggtcatcctatagcgaaagatcctaagtac
ggtgatacagatttcgataacactatgtctaggcttgggttaaaccgactgtttttgcac
gcctggcagctgcgttttctgcatcctgttacgggaaaagaagtggcgtttgaagcccct
ctggatgacaacttacagcaaactttaaagcagctgacggcgcaataa
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