Idiomarina loihiensis L2TR: IL1388
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Entry
IL1388 CDS
T00218
Symbol
phrB_1
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ilo03400
]
IL1388 (phrB_1)
Enzymes [BR:
ilo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IL1388 (phrB_1)
DNA repair and recombination proteins [BR:
ilo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IL1388 (phrB_1)
Prokaryotic type
IL1388 (phrB_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAV82228
UniProt:
Q5QV18
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All DBs
Position
complement(1491462..1492868)
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AA seq
468 aa
AA seq
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MREAIWFRSDLRILDNPAVFSACHGDEPPLAIFFVCHETWKSHDWAPIKVDFIWRNLECL
QQDLAEKGIELQVQLVPKFSQVPGALRSFCRENKIARVHINAEYALDEKRRDAATNAVLS
NDDIELVSHHGNLLVSPGEVRTQQGDYYKKFTPFNRRWRQVLSEKTYSEPLQIKSYSRVT
AKGLPECPLGRKDSSDWSAGEQQVLGKLGQFVGHSVDDYQQARDLPAENGTSQLSAYLAQ
GVIGPQTAVRALHKFSPEFPFGLASGADTWLTELAWREFYQHLMYFVPRLSKGESFQSET
DSIQWLEDDDAFQRWCDGRTGYPIVDAGMRQLTSTGWMHNRLRMITANFLVKDLLVDWRK
GEAFFMQHLIDGSFPANNGGWQWSASVGTDAVPYFRVFNPVKQSEKFDPDGQYIRKWVEE
LKEVPTKYIHWPHSWLQQQSSNNYCDPMVEHKFARERFLTTFKQVKNG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagcaatttggtttcgtagtgatttaagaattttagacaacccggccgtgttt
tctgcatgccacggcgatgagccacccttggctatattttttgtgtgccacgaaacctgg
aaaagccatgactgggcaccgataaaagttgactttatttggcgaaacttagaatgcctg
cagcaggatttagccgaaaagggcattgaactgcaagtgcagttagtacccaaattcagt
caggttccaggggctttacgatccttttgtcgggaaaataaaattgcccgggtacatatt
aatgcggaatatgcgctggatgaaaagcgtagagacgcggctaccaatgcggtactaagc
aatgatgatattgaactggtttcgcatcatggtaacttgttggtgtcgcccggagaggtc
agaacacaacaaggtgactactacaaaaagttcacgccttttaaccggcggtggcgacaa
gtattaagcgaaaaaacttacagcgaaccgctgcaaattaaatcttattctcgagttacc
gcaaaaggcctgcctgaatgcccgttggggagaaaagattcgtctgactggagtgccggc
gagcaacaagttttggggaaactgggtcaattcgttggccacagcgttgatgattatcaa
caagcccgagacttgccggctgaaaacggaacctcacaactttccgcttatttggcgcag
ggcgttatcggaccgcagacggctgtccgggcattacacaagttttcgccggagtttccg
tttgggcttgcttccggggctgatacctggcttacggaactggcgtggagagagttctat
cagcatttaatgtactttgtgccgcgtttatcaaaaggtgagagctttcagtctgaaact
gacagcattcagtggttagaggacgatgacgctttccaacgctggtgtgatggccgaacc
gggtatccaattgttgacgccggaatgcgtcaattgacatcaaccggatggatgcacaac
cgcttaagaatgattacagctaattttctggtaaaagatctattagtggattggcgaaaa
ggtgaagcctttttcatgcagcatttaattgacgggagctttccggcaaacaatggcggc
tggcaatggagtgcttcggtcggaactgacgccgttccatattttcgtgtttttaatccg
gttaagcaaagtgagaaatttgatcctgacgggcagtacattcgtaaatgggtagaggaa
cttaaggaagtaccaacaaagtatattcactggcctcatagttggcttcagcaacaaagc
agtaataactattgcgaccccatggtcgagcacaagtttgctcgtgaacgattcctaaca
acgtttaagcaggtgaaaaatggataa
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