Idiomarina loihiensis L2TR: IL1420
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Entry
IL1420 CDS
T00218
Name
(GenBank) 3'-5' exonuclease/DnaQ family enzyme
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo03030
DNA replication
ilo03430
Mismatch repair
ilo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IL1420
03430 Mismatch repair
IL1420
03440 Homologous recombination
IL1420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ilo03032
]
IL1420
03400 DNA repair and recombination proteins [BR:
ilo03400
]
IL1420
Enzymes [BR:
ilo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IL1420
DNA replication proteins [BR:
ilo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IL1420
DNA repair and recombination proteins [BR:
ilo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IL1420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AAV82260
UniProt:
Q5QWG7
LinkDB
All DBs
Position
1529002..1529748
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AA seq
248 aa
AA seq
DB search
MLYLAPENKQKQKPRKSKNIDWPKQFETLEQLSHSQALKRYYSQGISSPDTPINKTPMVA
VDFETTGLDPEQHGIVSIAAIPMTTERILFSEAKSWVVKPRRSLTDESVVIHGITHSEIE
HAPDLESIIDELLELVAGKVWVVHYHGIERPFLQRGIKERLHENIQFPLIDTMEIEARFH
RKPLSFWQKLLGKKPESIRLADSRTRYNLPFYPPHNALTDALACAELLQAQIAYHFEPDT
PLGEIWLP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcttgccccggaaaacaaacaaaaacaaaagcccagaaaatctaagaacatt
gactggcccaaacaatttgaaaccttagaacagctgagccactctcaggcgcttaaacgg
tattacagtcagggcatcagttcgccggatacgcccattaataaaacgcccatggttgcc
gtcgactttgaaaccacgggcttagatcctgaacagcatggcatagtcagcatcgccgca
atacctatgaccacagagcggattttattttcagaggcaaaaagctgggttgttaaacca
cgacgcagtcttacggatgaatccgtcgttatacatggtattactcatagcgaaattgaa
cacgcccccgatttagaaagtattattgatgagctactggagcttgtcgccggaaaagtc
tgggttgttcattaccacggcattgaacgccctttcctgcaacggggaattaaagaacgc
ctgcacgaaaacatccagtttccgcttattgatacaatggaaattgaagctcgattccac
cgtaaaccgttatccttctggcaaaaactacttggaaaaaaaccggaatcaattcgcctt
gcggacagtcgtacccgctataacctacctttttatccgccgcataatgcgttaactgac
gcactggcatgtgcggaacttctgcaggctcagatagcctatcactttgagccagatacc
ccacttggtgagatttggctgccttga
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