Idiomarina loihiensis L2TR: IL1987
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Entry
IL1987 CDS
T00218
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo00540
Lipopolysaccharide biosynthesis
ilo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IL1987 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ilo01005
]
IL1987 (kdtA)
Enzymes [BR:
ilo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
IL1987 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
IL1987 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
IL1987 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
IL1987 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
ilo01005
]
Lipid A
IL1987 (kdtA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Kdo
RIO1
TCAD9
APH
Pkinase
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AAV82819
UniProt:
Q5QY67
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All DBs
Position
complement(2119021..2121006)
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AA seq
661 aa
AA seq
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MQLWIYGVLIRLVTPAVFVWLWLRGGKDSRYRQNWSERLALGSVDKKQHGCLVIHSVSVG
ETLAAKRLIEQLLRQEPGQKILITCMTPTARELIQQHFADTVSCRYWPIDSPGAAKRFVR
KFKPKAVWVMETELWPQMLNQFSKANIPVALLNARLSARSAAGYRRFHWLMKKVWKQLTL
VSVQNKETARRMKVLGVPDSVLFVDGNLKYDIELSVTDIEKALLWRQSCASRHVWLASSS
HPGEHELLLEAHKLIQQDLSNSCLIIAPRHPEQFEVVAKMIRESGLKLARRSESNAIPED
CDVFLADSMGEMMLWGQLASASFVGGSIIERGGHNPLEVIAAGSNVMSGRHVFNFPQVYG
ELAKAGAVQWVNNAGEIKQAVELMQQTAVMKAQHEAAKSVLQTHQGATLRVLKRALEYTL
TGSGMIKTEQSPQGLIRYDSDIFETIEDKHFTAQYWQQQKSIAGNSTGRATVWFIQQGDL
GLLLRHYYRGGLVGKINKDRFLREPAEKSRAIHEFDLLLKLREIGLPVPRPVAARMEKTA
VFSYKADILVEVIPGAVDVFRLLREKKLSAELWQKLGSVIKELHDTGVYHSDLNCHNLML
DDKDKAWIVDFDKCDFRENGDWKEANIQRLLRSLRKEKEKNETFYWKESRDWPELLTGYR
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtggatctacggagtattaatacggctggtcactccagccgtttttgtctgg
ttgtggctacgcggcggaaaagacagtcgctaccgtcagaactggtcagaacggcttgcg
ctgggctctgttgataaaaaacagcacggctgtttggttattcatagtgtttccgttggt
gaaaccttagcggcgaaacggttaatcgagcagcttttgcgtcaggagccaggtcaaaaa
atactcattacctgtatgacaccaacggcccgggaacttatccagcagcattttgccgac
actgttagttgtcgctactggccgatagatagtccgggtgccgcgaagcgttttgtgcgt
aagtttaaacctaaagccgtgtgggtaatggaaaccgagctttggccgcaaatgttgaac
caattttccaaagcgaatattcctgtcgcattgttaaacgcgcgactttcggctcgctca
gcggcaggttatcggcgttttcattggttgatgaagaaggtctggaaacaactgacactg
gtttccgttcagaataaagaaacggcgcgcagaatgaaggttttaggtgtccccgatagt
gtgctttttgtggacggaaacctaaaatacgacattgagctttctgtcacagatattgag
aaggctctgttgtggcggcaaagctgtgcgtcgcgacatgtgtggcttgccagtagcagt
catccgggcgagcatgagctgctgttagaggcacataaactgattcaacaggacttatcc
aattcctgtcttatcattgccccgcgacaccctgagcaatttgaggtggtagcaaaaatg
atacgggagtccgggcttaagcttgcccgcagaagcgagagtaatgcgatacctgaagat
tgtgatgtctttcttgctgacagcatgggcgaaatgatgctttgggggcaattagcctcg
gcgagctttgtcggcggaagtattattgagcgaggcgggcataacccccttgaagttata
gcagctggctccaatgttatgtcagggcggcacgtgttcaatttcccacaagtttatggt
gagctggcaaaagccggtgccgtgcagtgggttaataatgccggagaaattaaacaagct
gtggagttgatgcagcagacagctgtcatgaaagcgcaacatgaagctgctaaaagcgtt
ttacaaacgcaccagggtgctacgttaagagtattaaagcgggcactggaatatactctg
acaggaagcggtatgataaaaacagagcagagtccccaagggcttattcgctacgacagc
gatatttttgaaacgatagaagacaagcattttacagcccagtattggcagcagcagaag
tcgattgcaggaaactcaacgggacgcgcaacagtctggtttattcagcaaggcgatttg
ggacttttactgcggcattactatcgtggtggtttagttggtaaaattaataaagatcgt
tttttacgtgagccggcggaaaaaagccgggcaattcatgaatttgatttgctgctaaag
ctgcgggaaattggtttgcccgttccgcgtccggtagccgctcgtatggaaaaaacagca
gtttttagttacaaagcagacatattggtggaagttattccgggggctgtcgatgttttt
cgcttactgcgtgaaaagaaactatccgcggagctatggcaaaagttgggaagcgtcatt
aaagaattgcatgataccggtgtctaccattcagatttaaattgtcacaaccttatgctg
gatgacaaagacaaagcctggattgtcgattttgacaagtgcgacttccgtgaaaacggt
gactggaaagaagctaatatccaacggctactgcgctctttacgcaaagaaaaagagaag
aatgaaaccttctattggaaggagtcccgtgactggccagaactattaacaggctatcgt
cgttaa
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