Idiomarina loihiensis L2TR: IL2223
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Entry
IL2223 CDS
T00218
Symbol
hepA
Name
(GenBank) Probable ATP-dependent RNA helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ilo03021
]
IL2223 (hepA)
Transcription machinery [BR:
ilo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IL2223 (hepA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
Tudor_RapA
DEAD
NAT10_TcmA_helicase
AAA_22
AAA_34
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AAV83055
UniProt:
Q5QVN2
LinkDB
All DBs
Position
2375711..2378371
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AA seq
886 aa
AA seq
DB search
MSEFRVGQRYLSETETELGLGMITQAEGRHLTVMFPATGEVRLYSAQEAPLARYQLQVQQ
QGKHADGWSFTIQELTESQGIVTYHGLRDDNQESVVVPETQLSHQVDSNPALTRLLAGQA
DRLDMYQLRCEASEHLAHHQASEVAGLLGVRTHLLPHQLYIAKTVADRYHPRVLLADEVG
LGKTIEAGMIIKRRLNTGRSQRVLIVVPESLMHQWLVELRRRFALNFTLFDDERCEQAEA
DSENPFLTEQHIIISSRFMHESRWSESLLKAEFDLLVIDEAHHLQPEAPEFSAVKNLCEA
VPGLLLLTATPEQEGAEGHFQRLQLLDPDRFSDFASFQQEQTQYKELAEQAESVTDPAEL
DDLLDKHGTGRVMFRNRRADIGGFPERHFHPVELDECEPDEDMPWWMEDPRIDWLLNHIK
QNRSEKALLICKTAEQVLDLSEALRVLAGVQAATFHEGMTLTERDRSAAFFASEEDGSPI
LLCSEIGSEGRNFQFVHQLILFDLPSNPDLLEQRIGRLDRIGQQQNIDIYLPYCKGSAEA
ILLPWYEQGMNAFSQCNAIGRKLYDAFGTDIEQAVAEQEPLSDELLKQTKELHETWLERN
REGQDKLQALNACRPETAEKIIEQIHSDSDTDTLADFMIAFFDRFGVNNEVLDEERWFIR
PGEHMRVGSLPGLPDDGITITFDRVTALNFEDTDFLSWDHPMVQAALELLTADDFGSTCV
AELKNPAIPAGTWFLELDFASIVPAPKAAALQEFCPLQSLRLLFNGQGQELSAKVSRELL
DQQSSFIDKKTARQILRQLRDPAQKIIQSGQQQAREWQQKQLDKVKQNALDALQHERTRL
LELRKKNPSVRSSEIEAINWREEQITAALESPQLSLQAVRILVNNH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagtttagagttggacagcgttaccttagtgaaactgaaaccgaattagggcta
ggcatgatcacccaggccgaagggcgtcacttaaccgtgatgttccccgcaaccggtgaa
gtgcgactgtattcagctcaggaagcccctctggcccgttatcaactgcaagtacagcaa
cagggcaaacacgccgatggctggagcttcacaattcaggaactgacagaatcgcagggt
attgtgacctaccatggtttacgcgatgacaaccaggagtcagttgtggttccggaaact
cagttatcacatcaggtggacagtaatccggcattaacccgtttactggccggccaggct
gaccgcctggatatgtatcagctgcgctgcgaagccagtgaacacctggcgcatcatcag
gccagtgaggttgccggtttattaggtgttcgtacccatttgctgccgcaccagttgtat
attgccaaaaccgttgccgaccgttaccacccgcgagtgcttttagccgatgaagtgggc
ttaggaaaaaccattgaagccggcatgatcatcaagcgccgcctgaataccggccgctcg
cagcgggtcttaattgtggtaccggaatctttaatgcatcagtggctggttgagttacgc
cgccgctttgcgctgaactttactctgtttgatgatgagcgttgcgagcaggcggaagcc
gacagtgaaaatccgtttttaactgaacagcacattattatcagtagccgctttatgcac
gagtcgcgctggagtgagtcattactgaaagctgagttcgacttattagttatcgatgaa
gcccaccatttacagcccgaagcgccggaatttagcgcggttaaaaacctttgtgaagca
gtgcccggcttgttgctgttaacggcgacccctgaacaagaaggtgcagaaggtcatttc
cagcgactgcagttactggaccctgacaggttctccgactttgccagtttccagcaagag
caaacacagtataaagaattagcagaacaggccgagtctgttactgaccctgcagagctt
gatgacctgctggataaacatggtaccggccgcgttatgttccgtaatcgccgggccgat
attggcggttttcctgaacgccattttcatccggtagagctggatgagtgcgaacccgat
gaagacatgccctggtggatggaagatccgcgcattgactggttattgaatcacattaaa
cagaaccgctcggaaaaagcactgctgatatgcaaaacggcagagcaggtgctggattta
tccgaagccctgcgggtattggctggtgtgcaggcggcaaccttccatgaaggcatgacg
ctgaccgaacgagaccgttctgccgccttttttgccagcgaagaagacggtagccctatt
ctgctgtgctcagaaattggcagcgaaggccgcaattttcagtttgtacaccaacttatt
ttattcgacttgccgagcaaccctgacttgctggagcaacgcattggccgcttagaccgc
attggtcagcagcagaatattgatatttatctgccttactgcaaaggttcagcggaggcc
atattgttgccctggtacgagcagggtatgaacgccttctctcagtgtaatgcgataggc
cgtaaactgtacgatgcttttggcacggacattgagcaggctgttgctgagcaagagcca
ctcagtgacgagttgctgaagcagacgaaagaactgcatgaaacctggctggagcgtaac
cgtgaagggcaggataagttgcaggcactaaacgcctgtcgtcctgaaaccgctgaaaaa
atcatagagcaaattcatagcgacagcgataccgacaccctggccgactttatgattgcc
ttctttgatcgctttggtgtgaataacgaagttctggatgaagagcgctggtttattcgt
ccgggcgagcatatgcgcgtcggcagcctgccgggactgccggatgacggcatcaccata
acctttgacagagtcaccgcgctgaactttgaagatactgactttttaagttgggatcac
cctatggtgcaggcggcgcttgaactgctgactgcggatgactttggcagcacctgcgtt
gcagagctgaaaaacccggcaattccggccggcacctggttcctggaactggacttcgcc
agcatagtaccggcacctaaagccgcagcattgcaggagttctgcccattacaaagttta
cgcctgctgtttaatggtcagggacaagagctgtccgctaaagtgtcacgcgagctgctg
gaccaacaatccagctttattgataagaaaaccgcacgacagatattgcgtcagttacgc
gacccggcgcaaaaaattattcagtccggccagcaacaggctcgtgagtggcagcaaaag
caactggataaggtaaagcaaaatgcgctggacgcactgcaacacgagcgcacacgactg
cttgaattacggaagaaaaacccgtcggtacgcagcagtgaaatagaagcgataaattgg
cgcgaagagcaaattacggcggcgctggaaagcccgcaattatcgcttcaggccgtgcgt
attctggtgaataaccattaa
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