Idiomarina loihiensis L2TR: IL2280
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Entry
IL2280 CDS
T00218
Symbol
groL
Name
(GenBank) Chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IL2280 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ilo03019
]
IL2280 (groL)
03110 Chaperones and folding catalysts [BR:
ilo03110
]
IL2280 (groL)
03029 Mitochondrial biogenesis [BR:
ilo03029
]
IL2280 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ilo04147
]
IL2280 (groL)
Enzymes [BR:
ilo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IL2280 (groL)
Messenger RNA biogenesis [BR:
ilo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IL2280 (groL)
Chaperones and folding catalysts [BR:
ilo03110
]
Heat shock proteins
HSP60 / Chaperonin
IL2280 (groL)
Mitochondrial biogenesis [BR:
ilo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IL2280 (groL)
Exosome [BR:
ilo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IL2280 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IL2280 (groL)
Exosomal proteins of breast cancer cells
IL2280 (groL)
Exosomal proteins of colorectal cancer cells
IL2280 (groL)
Exosomal proteins of bladder cancer cells
IL2280 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAV83112
UniProt:
Q5QVT4
LinkDB
All DBs
Position
complement(2443598..2445244)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGNTARQKMLKGVNILADSVKVTLGPKGRNVVLDKSYGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGI
DKAVIAAVEELKKISQPCADSKAIAQVATISANADHTIGEIIAQAMDKVGQEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQESGSVELDNPFILLIDKKISNIRELLPVLEGV
SKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
VSEEIGMELEKTQLEDLGTAKRVVITKDNTTVVDGNGDDTAIDGRVNQIKQQMEDTTSDY
DREKLQERLAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RAASKLAELRGDNEEQNVGIRLALRAMEAPLRQIAMNAGAEGSVVANNVRAGEGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASVGALMITTEAMIADIPQDDNAGGMPGGDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcaaatttggtaacacagcacgtcaaaaaatgctgaaaggcgtt
aacattcttgctgattcagtaaaagtgacgctgggtccaaaaggtcgcaacgttgtatta
gataagtcttacggttctcctgttatcaccaaagacggtgtgtctgttgcgaaagaaatc
gagctggaagataagttcgagaacatgggcgcgcagatggttaaagaagtggcgtctaaa
gcaaatgacgaagcgggtgacggtacaacaaccgcaaccgttctggctcaagccattgtt
aacgaaggcttgaagtcagtagccgcaggcatgaacccgatggatcttaagcgcggtatc
gacaaagcggttatcgctgcagttgaagagctgaagaaaatttctcagccttgtgccgac
agcaaagccattgctcaggtagcgactatttctgcaaacgctgatcacactattggcgaa
atcattgctcaggcaatggacaaagtaggccaggaaggtgttatcaccgttgaagaaggt
caggcactgactgacgagctggacgttgttgaaggtatgcagttcgaccgtggttacttg
tctccttacttcattaacaaccaggaaagtggttcggttgaattagacaatccgttcatt
cttctgattgataagaaaatctctaatatccgcgagttactgccggtattagaaggtgtt
tctaaagccggtaaacctctgctgattattgctgaagacgttgaaggcgaagcgctggca
actctggttgtgaacaatatgcgtggcatcgttaaagttgctgcggttaaagcaccaggc
tttggcgaccgtcgtaaagctatgctgcaggacattgctgttctgactggcggtactgtg
gtttctgaagaaattggtatggagctggaaaaaacgcagctggaagacttaggtactgcg
aagcgcgttgtgattactaaagacaacaccactgttgttgacggtaatggcgacgatacc
gctatcgacggtcgtgttaaccaaatcaagcagcagatggaagacactacgtctgactat
gaccgtgaaaaactgcaagagcgtctggctaagttagctggcggtgttgcggtgattaaa
gtcggcgctgctactgaaatggaaatgaaagagaaaaaagcgcgcgttgaagatgcgttg
catgcaactcgtgcagctgttgaagaaggcgtggtacctggtggtggtgttgctttggtt
cgcgctgcgagcaaactggcagaactgcgtggtgacaacgaagaacagaacgttggtatc
cgtttagccctgcgtgcgatggaagcgccgttgcgtcaaatcgcaatgaacgctggcgcc
gaaggttctgtggttgctaacaacgtacgtgctggcgaaggtaactatggttacaatgcc
ggtaacgacacttacggcgatatgctggaaatgggtattctggatccaaccaaagtaacc
cgttcggcacttcagttcgcggcatctgttggcgcactgatgatcaccaccgaagcaatg
attgctgacatcccacaagatgacaacgcaggcggcatgcctggcggcgacatgggtgga
atgggcggtatgggcggcatgatgtaa
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