Idiomarina loihiensis L2TR: IL2551
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Entry
IL2551 CDS
T00218
Symbol
uvrD
Name
(GenBank) Superfamily I DNA helicase, UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo03420
Nucleotide excision repair
ilo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IL2551 (uvrD)
03430 Mismatch repair
IL2551 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ilo03400
]
IL2551 (uvrD)
Enzymes [BR:
ilo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IL2551 (uvrD)
DNA repair and recombination proteins [BR:
ilo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IL2551 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IL2551 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF4391
AAA_22
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AAV83383
UniProt:
Q5QUT0
LinkDB
All DBs
Position
complement(2734880..2737051)
Genome browser
AA seq
723 aa
AA seq
DB search
MSTHPLLADLNERQQQAVSATDGHMLVLAGAGSGKTRVLVHRIAWLIQERQYSPFSILAV
TFTNKAAAEMRGRVEQLVGSSVRGMWIGTFHGLAHRLLRAHYMDVGLPQNFQIIDSDDQQ
RLIKRLIKSLNLDDKRWPAKQAQWYINGKKDEGLRPQHIETYDPTEQTLKEIYTLYQESC
DRAGLVDFAELLLRAHELLRNNRIVREHYQNRFRHILVDEFQDTNSIQYAWIRLLAGSQN
SVTIVGDDDQSIYGWRGAKVENIHQFLSDFEGSETIRLEQNYRSTSTILRAANSVISNNS
GRLGKDLWTDGNDGEPISLYAGFNEMDEARYIVARIEEWRDQGGSLQDSAILYRSNAQSR
ILEEALLHARVPYRIYGGLRFFDRQEIKDALAYLRILGNRDDDAAIERVINTPTRGIGNR
TMDMIRQAAREREESLWQAAKYMVNEKQLAGRARNAVGSFLDFIENLDDETEEFSLGRLS
DEVIKKSGLMAMYEAEKGEKAETRVENLKELVTACENFTLDDDEEDMTPLNAFLAHASLE
AGEEQADEYQDAVQLMTLHSAKGLEFPLVFMTGVEEGLFPSQQSMDEPGRLEEERRLCYV
GMTRAMEKLVLTYAEQRRIYGQELFHKVSRFISEIPADTLHEVRLQTRVEKPASYGRFNN
AASHESFEQTGYSLGQRVRHPKFGEGTVLNYEGTGPQSRIQINFDNVGSKWLVVAYARLD
PVF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacacccgcttctggcagatttaaacgaacgacagcagcaggccgtatctgca
accgacggtcacatgctggttctggccggagccggtagtggtaaaacccgtgtgttggtg
caccgcattgcctggcttattcaggagcggcagtattcgccctttagtattctggctgtt
acctttaccaataaagcggcagccgaaatgcgcggacgggttgagcaactggtaggcagc
tcggtacgtggtatgtggattggtaccttccatggtctggcgcatcgcttattgcgtgcg
cattatatggacgttggtctgccgcaaaactttcagataattgacagtgatgaccagcaa
cggttaattaagcgtttaattaaaagcttaaacctggatgataaacgctggccggcaaag
caggcgcagtggtacatcaatggtaaaaaagacgaaggtctgcgcccgcagcacattgaa
acctacgatcctacagagcaaaccttaaaagaaatctacactttgtatcaggaaagctgt
gaccgtgcaggcctggtggattttgccgaattgctgctgcgtgcgcacgagttactgcgg
aataaccgcattgtccgcgagcattatcaaaaccgcttccgccatattctagtcgacgag
tttcaggacaccaactcaatccagtatgcctggatccgtttattggctggcagccagaac
agtgtgaccattgttggtgacgatgaccagtccatttatggctggcgtggtgccaaagtc
gagaatattcatcagtttctatcggattttgaaggctctgagactatccgtctggagcag
aactatcgctctacaagcaccattttgcgcgccgcaaactcggttatttccaataactcg
gggcgtctgggtaaagacttatggacagacggtaacgacggcgagccgataagcctgtat
gcgggcttcaatgaaatggacgaagcccgttatattgtagcacgaattgaagaatggcgt
gatcagggcggttcgctgcaagactccgccattttataccgaagtaacgcacaatcacgt
attttagaggaagcgttgctgcatgcgcgcgtcccgtatcgtatttatggcggcttgcgt
ttcttcgaccgccaggaaataaaagacgcactagcgtacttgcgaattctcggcaaccgc
gacgatgacgccgctatcgagcgggtgatcaatacgccgacgcggggcattggtaatcgt
actatggatatgatccgccaggctgcccgagaacgtgaagagtctttatggcaggcggca
aaatatatggtcaatgaaaagcagttggccgggcgtgcgcgtaacgcggtgggttcgttt
ctggattttatcgagaacttagacgacgaaaccgaagagttttcattaggccgcctgagt
gacgaagtcattaagaaaagcggtctgatggccatgtacgaggccgaaaaaggcgaaaaa
gcggaaacccgggtcgagaacttaaaagagctggtgactgcctgtgaaaacttcactctg
gatgacgacgaagaagacatgacaccgctgaatgcgtttttagcacacgcttcgcttgaa
gctggtgaagagcaggccgatgaatatcaggatgccgtacagctcatgacactgcacagt
gcgaaaggtctggagtttccattagtatttatgaccggtgtggaagagggcctgttcccg
tctcagcaatcgatggatgagcccggaaggctggaagaagagcgccgcctttgctacgta
ggtatgacccgcgcaatggaaaagttagtgcttacttatgccgaacagcgccgtatttac
ggtcaggaactgtttcataaagtcagtcgctttatcagtgaaataccggcggacactctg
catgaagttcggctgcaaacccgggtagaaaagcccgccagttatggccggttcaataac
gcagccagccacgaaagctttgagcaaacgggttattcattaggccaacgcgtgcgccac
ccgaagtttggcgaaggtacggtgttgaattatgaaggtaccggtccgcaatccagaatt
cagattaacttcgacaatgtcggcagcaagtggctggttgttgcttatgcacgactggat
ccggttttctaa
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