Idiomarina loihiensis L2TR: IL2636
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Entry
IL2636 CDS
T00218
Symbol
thdF
Name
(GenBank) ThdF
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ilo
Idiomarina loihiensis L2TR
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ilo03016
]
IL2636 (thdF)
Transfer RNA biogenesis [BR:
ilo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
IL2636 (thdF)
Prokaryotic type
Methyltransferases
IL2636 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
ABC_tran
Arf
AIG1
AAA_28
Roc
UBM
MT0933_antitox
SRPRB
AAA_29
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
AAV83468
UniProt:
Q5QZJ5
LinkDB
All DBs
Position
complement(2835417..2836793)
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AA seq
458 aa
AA seq
DB search
MQTETDFDDTIVAQATPPGRGGVGIVRVSGKACKEVAEKLLGHCPKPRKAEYLPFYDLQE
QLLDEGIALFFPGPNSFTGEDVLELQGHGGPVIIDMIIRAILEIPGIRPARPGEFSERAF
LNDKLDLTQAEAIADLIDTNSEQAAKAALQSLKGEFSHKIDQLVDAVIHLRIYVEAAIDF
PDEEIDFLSDGKVSGDLAEIIDQLFHIEQEAKQGTLMREGMRIVIAGRPNAGKSSLLNAL
AGRESAIVTEIAGTTRDVLREHIQIDSMPLHIIDTAGLRESPDHVEKIGIERAWDEIRQA
DRVLFMVDSQETSAIHPDDIWPEFFAQLPEDMPYTVIRNKVDLSEEPTGIDEHNNIPVIH
LSAKTGHGIELLREHLKHCVGYSATSEGSFMARRRHLEALAKAKVHLLQGLEQLEANMAG
EILAEELRLTQQHLNEITGEFTSDDLLGQIFGSFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgaaacagattttgacgacaccatagtagctcaggcaacgcctcccggacgc
ggcggtgttggtattgttcgcgtgagcggaaaagcctgtaaagaggttgcagaaaagctg
ttaggtcactgccccaagcctcgtaaagcagagtacttgcctttttatgacttacaggaa
caactgttggacgaaggcatagcgctctttttcccaggtccaaactcctttaccggagaa
gatgtcttagaactgcaaggccacggcgggccggttattatcgatatgataattcgagca
atactggaaattcccggtattcgccctgctcgtcccggtgagtttagcgaacgagcattc
ttaaacgacaagctcgatctcacccaggcagaagccattgccgacctaattgataccaac
tcagagcaggccgcaaaagccgccttacaaagcctaaaaggtgagttttctcataaaatt
gatcagttggtagacgccgttattcacctgagaatatacgttgaagcggctatcgacttt
cctgatgaagaaatcgattttctttccgatggcaaagtatccggcgatttagctgaaatt
atcgaccagctgttccacatagaacaagaagccaagcaaggcacgctcatgcgcgaaggc
atgcgcattgttattgccggacgccccaatgcgggtaagtccagcttgcttaacgcgctg
gcgggtcgtgaatcagctattgtgacagaaatagccggaaccactcgcgatgttctgcgg
gagcacattcaaatagacagtatgccgctgcatattatcgataccgcaggtttacgcgaa
agccctgaccatgttgagaaaattggtattgaacgcgcctgggatgaaatacgccaggct
gaccgcgtgctgtttatggtcgacagtcaggaaacctctgccattcatcccgacgatatt
tggccagagtttttcgctcagctaccagaagatatgccctacaccgttattcgcaataaa
gtcgatttatcggaagagcccacgggtatagatgaacacaacaacattccggttattcat
ctttccgccaaaaccggacacggcattgaattgcttagagaacacctaaaacattgtgtt
ggttacagtgcaacctccgaaggcagtttcatggcaagacgccgccatctagaggctctg
gctaaagcgaaagtacatctactgcaaggtctggaacagttagaagccaatatggcaggt
gaaatactggcagaagaactgcgtctaactcaacagcacctcaatgaaattaccggcgaa
ttcacttccgatgatctccttggccagatttttggttcgttttgtattggtaaataa
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