Ignatzschineria larvae: WMO13_05870
Help
Entry
WMO13_05870 CDS
T10445
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ilv Ignatzschineria larvae
Pathway
ilv03410
Base excision repair
ilv03430
Mismatch repair
ilv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ilv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WMO13_05870 (recJ)
03430 Mismatch repair
WMO13_05870 (recJ)
03440 Homologous recombination
WMO13_05870 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ilv03400
]
WMO13_05870 (recJ)
DNA repair and recombination proteins [BR:
ilv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WMO13_05870 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WMO13_05870 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WMO13_05870 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WZW86917
UniProt:
A0ABZ3BXU4
LinkDB
All DBs
Position
complement(1428304..1430034)
Genome browser
AA seq
576 aa
AA seq
DB search
MKIIRRTAHHSYQRPEHSTLLQRVLANRAITEDSELDLSLKGLYPYHSLSNIEPATQLVV
EAILTEKDILIVGDYDVDGATSIALAMRILRDFGVYNIRYIVPHRILDGYGLSRSLVQKI
LINPPDLLITVDNGISNIDGVALARENGIDVVVTDHHLPPETLPNANAIVNPNLPGDQFP
SKALAGVGVIFYLLLSVRAKLIEVGYFKGQAQGTIPNLGRYLDIVALGTVADLVPLDGNN
RRMAQQGLLRMRQGMMIPGIAALIEVSQRNREKLSTSDIGFSIAPLLNAAGRLDDMQVGI
ELLLTDQYEEAFAIAQQLYALNEERKMIERGMRAEANDALEKVQLKRDEVPLAICLYNEL
WHQGITGIVASRIKEQYYRPTFIFAYDNEGLLKGSGRSIQGIHLRDVISNVARDNPGIIN
TFGGHAMAAGLSIYEEYLPQFTEAINVEMAKSLEALESADEILSQKIYTDGALALEEYRL
DLVDEMKLAYPWGQQFPEPLFDDRFEVVDYRILKDLHLKFTLRKPGTHTLFEALAFFQAH
QIVDNVTEIHCAFKLDINEWRGERKLQLLIDYFEAV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatccgtagaacggcgcatcactcttatcaacgtcccgagcattcgacactg
ctacagcgcgtgctagcgaatcgtgcgattacagaggattcagaattagatctttcgctg
aaagggctctatccttatcattcgctaagtaatattgaaccagcaacacaattagtggta
gaggccattttaacggagaaagatatccttattgtgggggattatgatgtcgatggtgcc
acaagtatcgcccttgcaatgcgtattttacgggattttggtgtttataatatccggtat
atcgttccgcatcgtattctcgatggttatggactttctcgctctctagtacaaaagatc
ctcatcaatccccccgatctactcattacagtggataatggaatctctaacattgatggt
gtcgccttagctcgtgaaaatggaattgatgttgtcgtcacagatcatcatttaccgcca
gaaacattgccgaatgccaatgcgattgtgaatccgaatttgccgggtgatcagtttcca
agtaaagcactagccggcgttggcgttatcttttatctactgttaagtgtacgggccaaa
ctgattgaggtggggtacttcaaagggcaagcacaaggaaccattccaaatcttgggcgc
tatcttgatattgtggcgcttggtactgttgccgatttggtgccattagatggcaataat
cgcaggatggcgcaacagggtttactgcgaatgcggcaaggaatgatgattcccggcatt
gcggccttaattgaagtgtcacagcgtaatcgagagaagctttcgacgagcgacattgga
tttagtattgcccccttactcaatgccgcaggtcgcttagatgatatgcaagtgggaata
gagctgctattgaccgatcaatatgaagaagcttttgcgattgcacagcagctctatgcg
ctcaatgaagagcggaaaatgatcgagcgggggatgcgcgcggaagcgaatgatgccctt
gaaaaagtgcagttaaaacgggatgaagtgccgctcgcaatctgcctttataacgagtta
tggcatcaagggattactggtattgtcgcttctcgaatcaaagagcaatattaccgcccc
acctttatctttgcttatgataatgaagggctgctcaaaggctctggtcgctcgattcag
ggcattcatcttcgggatgtgattagtaatgttgcacgtgataatcccggtattatcaat
acctttggtgggcatgcaatggcagccgggctctcgatttatgaggagtatctgccacaa
tttaccgaagctattaatgttgagatggcgaaatctttagaggctttagaatccgccgat
gagatcttaagtcaaaagatctatacagatggagcacttgcgctagaagagtatcgatta
gatctggtggatgagatgaagcttgcttatccttgggggcaacaatttcctgagccacta
tttgatgatcgttttgaagtggtggattaccgtattttaaaagatctgcatctgaagttt
accttacgaaaacccggcactcacacgctctttgaggcgcttgctttctttcaagcacat
cagattgttgataatgtgacagaaattcactgcgcctttaagttagatattaatgaatgg
cgcggagagcgtaaattgcagttgttaatcgattattttgaagctgtataa
DBGET
integrated database retrieval system
