Ignatzschineria larvae: WMO13_07210
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Entry
WMO13_07210 CDS
T10445
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ilv Ignatzschineria larvae
Pathway
ilv03030
DNA replication
ilv03430
Mismatch repair
ilv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ilv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WMO13_07210 (dnaE)
03430 Mismatch repair
WMO13_07210 (dnaE)
03440 Homologous recombination
WMO13_07210 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ilv03032
]
WMO13_07210 (dnaE)
03400 DNA repair and recombination proteins [BR:
ilv03400
]
WMO13_07210 (dnaE)
Enzymes [BR:
ilv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WMO13_07210 (dnaE)
DNA replication proteins [BR:
ilv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WMO13_07210 (dnaE)
DNA repair and recombination proteins [BR:
ilv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WMO13_07210 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WZW87165
UniProt:
A0ABZ3BXB3
LinkDB
All DBs
Position
1749441..1752920
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AA seq
1159 aa
AA seq
DB search
MTFTHFNLHTEFSLVDGIIRIKPLFSALKEMGMTAVALTDLGNEFGAIKFYKTAMQSGIK
PIFGSDCLLAEGNDDLGKITIIAQNYTGYLNLAELLSYGYRSHQIRGVPHITYEKLQEYA
DGLIVIVAKESPVGRALLNQGTESATALLKQHFSAFLPDRLYIGLKRLGQENDERFITEV
LPIAESLQLPVIAINDVRFMQESDFDAHEIRTCIQSGHTMLDPNRPKNYSPQQYLRSIAE
MEALFHDIPEAMINSAELAKRCTVELILNKPQLPAFPIPEGMTIEEFFRAESYQGLEERI
GAKTEENQHYWERLDTELNVINNMGFPGYFLIVADFIQWAKDNAIPVGPGRGSGAGSLVA
WALKITDLDPLPYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYVAHKYGREAVSQIA
THGTMAAKAVIRDVGRALGHPYGFVDRIAKLIPMDLGITLEKALMQEPELFDLYKEDEEV
KILIDFAKQLEGLSKSVGRHAGGVVIAPTKLTDFSPLYCEEGSAALVTQYDKDDIEAAGL
VKFDFLGLRTLTIIDWALKNIEYNRGIKVDLHTMPLDDKATFQLLKACQTTSVFQLESRG
MKDLLRRLQPDNFEDIIALVALFRPGPLESGMVEDFINRKHGREEVIYPFPELEPVLKPT
YGVIVYQEQVMQISQIIGNYSLGGADLLRRAMGKKLPEEMEKQRSLFMAGAETLGFDAEK
AGRLFDLMEKFAGYGFNKSHSAAYALLSYQTAYLKEHYPAEFMAAVLSADLDHTEKIIII
IDEVKEMKIPIIRPSVNESSYQFTVNQAGAIIYGLGALKGYGKAAALQLIEEREENGPYR
DLFDFCRRVDLSKTSKRAIEILIRAGALDCLEPNLKTVSDRAAYRAQLLATMPEAIRLAD
QHRKNESSGQGDIFGLFDDMPAEEPQYSLQPAIPMSDNELLHDEKSVLGFFFTAHPVDQY
RQEIEAMTTTSLTKLKEMPEPQYHSRAVDDSVMIGGLVTAFYTRISKAGNKLYFVVLDDG
RSRAEIRLFEEMIQSFEAPIENDTILFIQGGYNWDSFNNAMTLRATALHSLESMRQRHAK
YLMIENHKPISPQDLAQLFAQLTPYRDDNGLQLIFKYHSPDSAGILQLEEFRILPQETIL
TELKRNFYHNLRFTIGYGQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgacatttacacactttaatcttcatactgaattctcccttgtggatggtattatccgc
atcaaaccgctctttagtgcacttaaagagatgggaatgaccgcggtggcactcaccgat
cttggcaatgagtttggggctattaagttctataaaacagcgatgcaatcggggattaaa
ccgatctttggctccgattgtctcttagcagaggggaatgatgatctcggtaaaatcacc
attattgcgcaaaattatacgggctatctcaatcttgcggagcttttaagctatggttat
cgtagtcatcagattcgcggtgtaccgcatattacttatgagaaactgcaggaatacgct
gacgggctgattgtcattgtcgccaaagagagtccggtaggcagagcgctactcaatcaa
ggtaccgaaagtgctactgcgctactgaaacaacatttctccgcttttcttcctgatcgc
ctctatattgggcttaaacgtctcgggcaagagaatgatgagcgctttattacagaagta
ttaccgattgcagaatcactgcaactgccggtgattgccattaatgatgtgcgctttatg
caggagagcgattttgatgcgcatgagatccgcacttgtattcaatcagggcataccatg
ctcgatccgaatcgcccgaaaaactactcaccgcaacaatatctgcgctccattgccgag
atggaagcattatttcatgatattcccgaagcgatgatcaatagtgcggaactggcgaaa
cgttgtacggttgagctcattcttaataaaccgcaactcccggcattccccattcctgag
gggatgactattgaagagttttttcgcgcggaatcttaccaaggattagaagagcgtatc
ggtgcgaaaacagaggagaatcagcactattgggagcgactcgatacagagttaaatgtc
atcaataatatgggcttcccgggttacttcctgatcgttgccgactttattcaatgggca
aaagataatgcgattcctgtaggtccaggacgtggatcaggggcaggttcccttgtggct
tgggcacttaaaatcaccgatcttgatccgctaccttatgatcttctctttgaacgcttt
ttgaatcctgaacgggtctcaatgccggacttcgacgttgacttctgtatggaaggccga
gatcgtgtgattgagtatgttgcccataaatatggacgggaagcggtctcacagattgca
acccatgggacaatggcggctaaagcggtgattcgagatgtagggcgcgcgttggggcat
ccttatggttttgtcgatcgtatcgccaaactgatcccgatggatctcggcattaccctc
gaaaaagcattgatgcaagagccggaactctttgatctctataaagaggatgaagaggtt
aaaatcctgatcgatttcgctaaacagctcgagggattatccaaatcagtgggtcgccac
gccggcggcgttgtgattgcaccgactaaattaaccgacttttccccactctattgtgag
gaaggatcagcggcgctcgtcacacaatatgataaagatgatattgaagcggccggcctt
gtgaaatttgacttcttaggcttacgtacgctcaccattatcgattgggcactcaaaaat
attgagtataatcggggtattaaagtggatcttcacacaatgcctcttgatgataaagcc
acttttcaactcctcaaagcttgccaaaccacatcggttttccagctagaatcaaggggg
atgaaggatcttcttcgccggttacagccggataactttgaagatatcatcgccttagta
gccctctttcgcccagggccactagaatcagggatggtggaggactttatcaatcgtaaa
catggtcgagaagaggtgatctacccatttcctgagcttgagccggtactcaaacccact
tatggggttattgtctaccaagagcaggtgatgcagatctcccaaattatcgggaattat
agcttaggcggtgcggacttactgcgccgagcgatggggaaaaagctcccggaagagatg
gagaaacagcgctcactctttatggccggtgcagagactttagggtttgatgcagaaaaa
gccggtcgtctctttgatctgatggaaaaattcgcaggttacggctttaacaaatcgcac
tcggcggcttatgccctactctcttatcaaacggcttatctcaaagaacattatcctgct
gaatttatggcggcagtactctcggcggatctcgatcatactgaaaagatcatcatcatt
attgatgaagtgaaagagatgaagattccgattattcgcccaagtgtgaatgaatcgagc
tatcaatttaccgtcaatcaagccggtgcaattatctatggtttaggcgcgctcaaagga
tatgggaaagcagccgcgctacaactaatcgaagaacgggaagagaatggtccatatcgt
gatctatttgatttctgtcgccgagtggatctctctaaaacatccaaacgcgctatcgaa
attctcatacgcgccggcgcattagattgtttagagcctaatctaaaaactgtgagtgat
cgggcggcttatcgtgcgcagttattagcaaccatgccggaagcgattcgtcttgccgat
caacatcgtaaaaatgaatcttcaggtcaaggggatatcttcgggctatttgatgatatg
ccggcggaggagccccaatacagcttacaacctgcaattccgatgagcgataatgagctg
ctccatgatgaaaaatcggtattaggtttcttctttaccgcacatcctgtagatcaatat
cgccaagagattgaagcgatgactacaacctctttgacgaaactcaaggagatgccggaa
ccgcaatatcactcaagggctgtcgatgatagtgtcatgattggtggtttagtgacagct
ttctatacgcgcatcagtaaagctggcaataagctctattttgttgtgctcgatgatgga
cgttcgcgggctgaaattcgtctctttgaagagatgattcaaagtttcgaagcgcctatt
gagaatgatacgatcctctttattcaaggaggttacaattgggattccttcaacaatgcc
atgacgctacgggcaacggcgcttcactctctagaatcgatgcgtcaacgtcatgcaaaa
tatctgatgatcgaaaatcataagcctatttcaccgcaggatttagcccaactatttgcg
cagctcactccgtatcgggatgataatggattacagcttatcttcaaatatcacagcccg
gatagtgccggtattttgcaactagaagagttccgcattttaccgcaagagacgatactt
acagaattaaaacgcaacttttatcataacttacgatttaccatcggttatggtcaataa
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