Ignatzschineria larvae: WMO13_08235
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Entry
WMO13_08235 CDS
T10445
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ilv Ignatzschineria larvae
Brite
KEGG Orthology (KO) [BR:
ilv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ilv03400
]
WMO13_08235
DNA repair and recombination proteins [BR:
ilv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WMO13_08235
Archaeal homologous recombinant proteins
WMO13_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
WZW87346
UniProt:
A0ABZ3BXV0
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All DBs
Position
1990115..1993378
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AA seq
1087 aa
AA seq
DB search
MRPIQLTLTAFGPYQGREVIDFRKLAPHDLFVISGKTGAGKTSIFDGISYALFGEASGAD
RKDATLSLRSDFASDQEPTTAELIFELRGKQYRIFRQLPYLKSGNKTLTQGKAEIYALNN
TGDQDDLFAETPLVERQIPNMVNPKIEALLGLNRDQFNQLVMLPQGEYQRFLTSKTADKE
AILRTVFNTEKYQNVVENLKLKADQSQKSVIKLQAHYNSLIQSIYQQLPVRESPFFQFFQ
EEAELQINSYQAIEGLEAESLFYQEKVKAITGDIMTQKQKLDVQKQTLLNTQNINEKFQA
LANAQQDFDNLNAQQVEINRLKNEISLAEKALSMEKFAHEVFRLRQEKQDTENHLSAAKQ
QLTEVQKNHQHATEQYQEAQEKEAEILALSEEITLLESRKRDVEMLDDLQATVIRTQKKS
AQLQQNISHLQQEITTKQSEKNRLQDAVREAETISHPIAIYQQLQSYLEQLAKLSAKQAE
QKQALITANEKKQQKSITLQAAKEARESAAIKFYQEQAVNLAYTLKEFEPCPVCGSIEHP
QKAEAHHSQILGDHAQNPQAGFDSANEALSLAQREYDQAVHRAQEILANIESIEQEIYQA
WQTVRYFANREAQYIAPLTLELNAEAMTTSVIETNSNKVALALKKGQTYWQSLQTLRSEI
SAIELLITQQQSELEVLKESHQTEKTRLTEAQSALTQILQHIPESLRDSTAYQTHLGAQK
SRLTTLKNRLKEAEKNLQETAQQGALAAQSVEQYQAQKAKIITSLEKAECAFQEVLLNAS
WIIECRQTTTEDEESEGREGSQSADETQFLQAQKLIPKLSDNRQVVEKFTQRYLLTQEKV
KTLTSELKDQKPQDIIELENKVQEQELKLETMQHTLLTHQQYIQNIAQTIENIKAQAQAL
ESARSIHEKTVEVYDLVRGQNRHRISLERFILIEYFEMIIHAANIRLEQMTHGQFQFIRS
EEIASRNVQSGLDLNVYDAYTGENRDVKTLSGGEKFKASLSLSLGMADVIQAHKGGISIE
TLFIDEGFGALDEESLLQAIDVLIALQASGRMIGVISHVEELKQTLPARIEVIKTRGGTS
QTNIIIK
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctatccaattaacattaactgcatttggcccttatcaagggagagaagtgatc
gattttcgtaaacttgcacctcacgatctctttgtgatttccgggaaaaccggtgccggc
aaaacatcgatttttgatggcatctcttatgcactctttggggaagcgagcggtgctgac
cgtaaagatgcaaccttgtcacttcgcagtgattttgcgagcgatcaagagccgacaacg
gcggaattgatttttgaactccgaggaaagcagtatcgtatcttccggcaactaccttat
ctcaaaagtgggaataaaacactgacacaaggtaaagcagagatatatgcactcaataat
acgggtgatcaagatgatctttttgccgaaacccccttagtggaacggcaaattcccaat
atggttaaccctaagatcgaggcattacttggtttaaatcgagatcaatttaatcagctc
gtgatgcttcctcagggggaatatcagcgctttttaacctctaaaactgctgataaagag
gcgattttacgtacagtctttaatactgaaaagtatcaaaatgtcgttgaaaacctcaaa
ttaaaagccgatcagtcacaaaaatcggtcatcaaactgcaagcccattataactcactg
attcaatctatttatcaacaacttccagttcgcgagtctcccttttttcagttcttccaa
gaagaagctgagctgcaaatcaatagttatcaagccattgaaggtttagaagcagagagc
ctcttttaccaagagaaagtcaaagccattaccggcgatattatgactcaaaagcaaaaa
ctcgatgtgcagaaacagacattactcaatacccaaaatatcaatgagaaatttcaagcc
ttagcgaatgctcaacaagattttgataacttaaatgcacaacaagtagagattaataga
ctgaaaaatgagatttcattggctgaaaaagcgttatctatggagaagtttgcccatgaa
gtttttcgcttacgacaagagaagcaggataccgaaaatcatctttcagcggcaaaacag
caactcactgaagtgcaaaaaaatcaccaacatgcaacggagcaatatcaagaagcccaa
gagaaagaggctgaaatacttgcattaagcgaagagatcaccctgcttgagagccgaaaa
agagacgttgaaatgctcgacgatctgcaagctacggttataaggactcaaaaaaagagt
gcgcaacttcagcaaaacattagccatttacaacaagaaatcaccacaaagcaatcagaa
aaaaataggctacaggatgccgttagagaagctgaaaccattagccaccctattgccatt
tatcaacaattacagagctatttagagcaactagcaaagttatccgcaaaacaagcagaa
caaaagcaggcactcattacggctaatgagaaaaaacaacaaaaatcgatcacactgcaa
gcagcaaaagaagcaagagaaagcgctgccataaaattctatcaagaacaagcggtgaat
cttgcatacactttaaaagagttcgaaccctgccctgtatgcggtagcatcgagcatccg
caaaaagcagaggctcatcattcgcaaatccttggagatcatgctcaaaatcctcaagcc
ggttttgatagcgccaatgaagctttaagtctagcgcaacgagaatatgatcaagcagtt
catcgcgctcaagagatacttgcaaatattgaaagtatcgagcaagagatctatcaagca
tggcaaacagtgcgctacttcgcaaacagagaagcacaatatattgcaccgctcacctta
gaacttaacgcggaagcaatgacaacgtctgtcatagaaactaacagcaataaggtggca
ttagcgcttaaaaagggacaaacatattggcagtcattacagactttacgctcagagatt
agcgcaattgagctgttaatcacacaacaacagtcagaacttgaagtgctgaaagaatcc
catcagactgaaaaaacacgattaacagaagcccaaagcgccttaacccaaattttacaa
catatcccggaaagcctccgggattccactgcctatcaaacacatttaggcgcacaaaaa
tcacgactcacaaccctcaaaaaccgcttaaaagaagccgaaaaaaacctccaagaaaca
gcacaacaaggtgcacttgccgctcaaagcgttgagcaatatcaagcgcaaaaagcaaaa
attatcacgagtttagaaaaagcagaatgcgctttccaagaagtgcttctcaatgcctca
tggataatagaatgccgacaaacaactacggaagacgaggagagtgagggacgggaagga
agtcagtctgctgatgaaacgcaatttctgcaagcacaaaaactgattcctaagctttca
gataatcggcaggtagtcgaaaaatttactcaacgttatctattaacacaggaaaaggtc
aaaacattaacgtcagagttaaaagatcaaaaaccccaagatattattgaacttgagaac
aaggtgcaagaacaggagctcaagcttgaaacaatgcaacatacccttttaacccatcag
caatatattcaaaatattgcccagacgattgaaaacattaaagcacaagctcaagcccta
gaatcagcccgttcaatccatgaaaaaaccgtagaagtatatgacctggttcgaggacaa
aatcggcaccgtatctcattagagcgttttattctcattgagtatttcgagatgattatt
catgccgcgaatattcgcctagaacagatgacccatggtcaatttcagtttattcgctcc
gaagagattgcgtctagaaatgtgcaaagtggtcttgatcttaatgtttacgatgcctac
accggtgaaaaccgagatgtgaaaaccctatccggtggggaaaaatttaaggcctctctg
agtctttctctcggtatggccgatgtgattcaagcccataaaggagggatttcgatcgaa
acgctctttattgatgaaggcttcggggcactcgatgaagaatcgctactgcaagccatt
gatgtactcattgcactacaagcctccggtagaatgatcggggtgatctctcacgttgaa
gagctcaagcagacattgccggcgcggatagaggttataaaaacacgaggcggaacaagc
caaacaaatattataatcaaataa
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