Iamia majanohamensis: PO878_00060
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Entry
PO878_00060 CDS
T08795
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ima
Iamia majanohamensis
Pathway
ima02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ima00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PO878_00060
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PO878_00060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ima03021
]
PO878_00060
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ima02035
]
PO878_00060
Transcription machinery [BR:
ima03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PO878_00060
Bacterial motility proteins [BR:
ima02035
]
Flagellar system
Flagellar assembly proteins
Stator
PO878_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Phage_CII
HTH_23
KORA
PhyR_sigma-like
HTH_28
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
WCO67117
UniProt:
A0AAF0BTR0
LinkDB
All DBs
Position
12128..12961
Genome browser
AA seq
277 aa
AA seq
DB search
MPATSEAEVHRLIEENLPLVRHVVFQVAVHFPRHVDRDELATAGALGLVEAARRYDESRG
VPFDRFAAQRIRGAILDAVRAADWAPRSVRTLARKLEQVEQRLATKLGRVPTAGEKADAL
GMEPDELRRLQDRMFRSVVLALEYEVADEEEELTLVDVLADDHTKEPSEELESRELHAYL
RDAVHLLPERHRLVIVGYFLEGRKSQELAQLLGVTESRISQLRSEALAMLRDGIEAQYEP
ASSEEPTGRVGRRKAGYADAIAGASEWPDRLTAVALH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccacgtcagaagccgaggtccaccgcctgatcgaggagaacctgccgctcgtg
cggcacgtggtcttccaggtcgcggtgcacttcccccgccacgtcgaccgcgacgagctc
gccaccgccggggccctcggcctggtcgaggccgcccgccgctacgacgagtcccggggc
gtgcccttcgaccgcttcgccgcccagcgcatccgcggggccatcctcgacgccgtgcgc
gccgccgactgggccccccgctcggtgcggaccctcgcccgcaagctcgagcaggtcgag
cagcgcctggccaccaagctgggccgcgtgcccaccgccggcgagaaggccgacgccctc
ggcatggagcccgacgagctccgccgcctccaggaccgcatgttccgctccgtcgtcctg
gccctcgagtacgaggtcgccgacgaggaggaggagctcaccctggtcgacgtcctcgcc
gacgaccacaccaaggagccctccgaggagctggagtcccgcgagctgcacgcctacctg
cgcgacgccgtccacctgctccccgagcgccaccgcttggtgatcgtgggctacttcctc
gagggccggaagtcccaggagctggcccagctcctcggtgtcaccgagtcccgcatctcc
cagctccgctccgaggccctcgccatgctgcgcgacggcatcgaggcccagtacgagccg
gcctcgtccgaggagcccaccggccgggtcggccgccgcaaggcgggctacgccgacgcc
atcgccggcgccagcgagtggcccgaccgcctgaccgcagtggcgctgcactag
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