Iamia majanohamensis: PO878_11860
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Entry
PO878_11860 CDS
T08795
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ima
Iamia majanohamensis
Pathway
ima03030
DNA replication
ima03430
Mismatch repair
ima03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ima00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PO878_11860 (dnaE)
03430 Mismatch repair
PO878_11860 (dnaE)
03440 Homologous recombination
PO878_11860 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ima03032
]
PO878_11860 (dnaE)
03400 DNA repair and recombination proteins [BR:
ima03400
]
PO878_11860 (dnaE)
Enzymes [BR:
ima01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PO878_11860 (dnaE)
DNA replication proteins [BR:
ima03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PO878_11860 (dnaE)
DNA repair and recombination proteins [BR:
ima03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PO878_11860 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WCO65194
UniProt:
A0AAE9Y3C0
LinkDB
All DBs
Position
complement(2509797..2513396)
Genome browser
AA seq
1199 aa
AA seq
DB search
MGDSFTHLHTHTEYSMLDGASRIEQVVAAAAADGQPALGITDHGNMYGVLPFYKACRDHG
INPVLGFEAYMAHEHRTERIQTRGKVDDTGGEGDGGKKAYYHLTLLAESDVGYRNLIQLS
SRAFMEGYYRKPKVDWETLADHAEGVIATTGCLGGHVLQSLLNGDEKGALMKAARLQEIF
GRDNLFVELQDHGIPEQHRTNPKLIDIARRIGAPLLATNDSHYTHADDAEGHDALLCVQT
GALIAQSENERFKFKGGGHYLKSAAEMRHLFRDVEVACDNSLWIAERADVTIDMGGKPKL
PSFPLPEGFASDTDYLRHLTFEGARQRWGGDLPDKVVERLAYELQIIDDMGFSAYFLITW
DLIKHARDMGIRVGPGRGSAAGCAVAYCLRITDLDPIRYDLLFERFLNPSRVSMPDIDMD
FDSRYRDEMIRYAAERYGRDHVAQIVTFSTIKARAAVRDAARVLGLPYAVGDKVAKAMPP
LVMGRDTPLYACLEEHEKFVDGYQRAAELRGMYEADPDVARVVDVAKSLEGLRRQDGIHA
AAVVITDESLTEYLPIQRKPGPGQTLEEAPVVTQYEMGNVEALGLLKMDFLGLRNLDVIT
DALALIKDFRGIDVDIDDPPLDDEPTFEMLRRGDSIGVFQMEGGGLRQLLRQLAPTTFED
VCALVALYRPGPMGVNMHVDYADRKNERRPVEFFHPDAKELLSDTYGLMIYQESVMRVSQ
QFAGYSLADADNLRKACGKKNREIMAKERSKFVDGCETAGYGRDLGTELFDIIENFADYA
FNKSHSFGYGFVAYQTAYLKANHRIEYLAALLTSVKANLEKAAVYLNECRISGIRVLVAD
VNRSKADFVPVRLEDGTEAIPFGLSAVRNVGAAIVAQMVDEREANGPYADFCDFCDRVPL
PVLNKRAIESLIKAGGFDSLGHPRKGLLQVFEPIIDMTLSRRRQEDQGVMSLFDDAPGGD
GPSFDDRPPIPDVEFDKTEKLRFEKEMLGLYVSDHPIMGLEDALARRTDCSLRELIERAE
AAEAGEATEVAPPSGGGREKRDKVVTVGGVITGLQHKFTKANARMAVFVLEDLEASLEVT
VFPRTFEAIGHVLADDLVVTMKARLDMRDDQPKLIAMEVTPCEDLSDDPPLRLRVPPHHL
SDQRVRDLKDLLVRFPGDSTVYLHVGEQVVRLPDGWSVDRGSGLVAELRVVFGADCLVG
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgactcgttcacccacctgcacacccacaccgagtactcgatgctcgacggggcg
tcgcggatcgagcaggtggtggcggccgccgcggccgacgggcagcccgcgctgggcatc
accgaccacggcaacatgtacggcgtcctgcccttctacaaggcctgccgcgaccacggg
atcaacccggtgctcgggttcgaggcctacatggcccacgagcaccgcaccgagcgcatc
cagacccggggcaaggtcgacgacaccggtggcgagggcgacggcggcaagaaggcctac
taccacctcaccctcctggccgagagcgacgtcggctaccggaacctcatccagctgtcg
tcccgggccttcatggagggctactaccgcaagcccaaggtcgactgggagaccctcgcc
gaccacgccgagggggtcatcgccaccaccggctgcctcggcggccacgtgctccagtcg
ctgctgaacggcgacgagaagggcgcgctcatgaaggcggcccggctccaggagatcttc
gggcgcgacaacctcttcgtggagctgcaggaccacggcatccccgagcagcaccgcacc
aaccccaagctcatcgacatcgcccggcgcatcggggccccgctgctcgccaccaacgac
agccactacacccacgccgacgacgccgagggccacgacgccctgctctgcgtgcagacc
ggcgccctcatcgcccagagcgagaacgagcgcttcaagttcaagggcggcggccactac
ctgaagtcggcggccgagatgcgccacctgttccgcgacgtcgaggtggcctgcgacaac
tcgctctggatcgccgagcgggccgacgtcaccatcgacatgggcggcaagcccaagctg
ccgagctttccgctgccggagggcttcgcctccgacaccgactacctccgccacctcacc
ttcgagggggcgcggcagcgctggggcggtgacctccccgacaaggtggtcgagcgcctg
gcctacgagctccagatcatcgacgacatggggttctcggcctacttcctcatcacctgg
gacctcatcaagcacgcccgcgacatgggcatccgggtcggtcccgggcgggggagcgcg
gccggctgcgcggtggcctactgcctgcgcatcaccgacctcgaccccatccgctacgac
ctgctcttcgagcgcttcctcaaccccagccgggtgtcgatgcccgacatcgacatggac
ttcgactcccgctaccgggacgagatgatccgctacgcggccgagcgctacggccgcgac
cacgtggcccagatcgtcaccttctcgaccatcaaggcccgggccgcggtgcgcgacgcg
gcccgcgtgctggggctgccctacgcggtgggcgacaaggtggccaaggccatgccgccg
ctcgtcatgggccgcgacacgcccctctacgcctgcctggaggagcacgagaagttcgtc
gacggctaccagcgggcggccgagctgcggggcatgtacgaggccgaccccgacgtggcc
cgggtggtcgacgtggccaagagcctcgagggcctccgccgccaggacggcatccacgcc
gccgcggtggtcatcaccgacgagtcgctcaccgagtacctgcccatccagcgcaagccg
gggccggggcagaccctcgaggaggcgccggtcgtcacccagtacgagatgggcaacgtc
gaggccctgggcctgctcaagatggacttcctgggcctgcgcaacctcgacgtgatcacc
gacgcgctcgccctcatcaaggacttccggggcatcgacgtcgacatcgacgacccgccc
ctcgacgacgagcccaccttcgagatgctgcgccggggcgactccatcggcgtgttccag
atggagggcggcggcctgcgccagctgctgcgccagctcgcccccaccaccttcgaggac
gtgtgcgccctcgtcgcgctctaccgccccgggcccatgggcgtgaacatgcacgtcgac
tacgccgaccgcaagaacgagcggcgcccggtcgagttcttccaccccgacgccaaggag
ctgctctccgacacctacggcctgatgatctaccaggagtcggtgatgcgggtgagccag
cagttcgccggctactcgctggccgacgccgacaacctgcgcaaagcctgcggcaagaag
aaccgcgagatcatggccaaggagcgctcgaagttcgtcgacgggtgcgagaccgcgggc
tacggccgcgacctcggcaccgagctgttcgacatcatcgagaacttcgccgactacgcc
ttcaacaagagccactcgttcggctacgggttcgtcgcctaccagacggcctacctcaag
gcgaaccaccgcatcgagtacctggcggccctgctgaccagcgtgaaggccaacctcgag
aaggccgcggtctacctgaacgagtgccggatctcgggcatcagggtcctggtcgccgac
gtgaaccggtcgaaggccgacttcgtgcccgtgcgcctggaggacggcaccgaggccatc
cccttcgggctctccgcggtccgcaacgtgggcgccgccatcgtggcccagatggtcgac
gagcgggaggccaacggcccctacgccgacttctgcgacttctgcgaccgcgtgcccctg
ccggtgctcaacaagcgggccatcgagtcgctcatcaaggccggcggcttcgactccctg
ggccacccccgcaaggggctgctccaggtgttcgagcccatcatcgacatgaccctctcc
cggcgccgccaggaggaccagggcgtcatgtcgctcttcgacgacgcccccggcggcgac
gggccgtcgttcgacgaccgccccccgatccccgacgtcgagttcgacaagaccgagaag
ctgcgcttcgagaaggagatgctcggcctctacgtctccgaccacccgatcatgggcctg
gaggacgccctggcccggcgcaccgactgctccctccgcgagctcatcgagcgggccgag
gcggccgaggcgggggaggccaccgaggtcgcaccgccctccggcggggggcgggagaag
cgcgacaaggtggtcaccgtgggcggggtcatcaccggcctccagcacaagttcaccaag
gccaacgcacgcatggccgtgttcgtgctggaggacctggaggccagcctcgaggtcacc
gtgttcccccgcaccttcgaggccatcggccacgtcctggccgacgacctggtcgtcacc
atgaaggcccgcctcgacatgcgcgacgaccagcccaagctgatcgccatggaggtcacg
ccctgcgaggacctctccgacgacccgcccctgcggctccgggtgccgccccaccacctc
tccgaccagcgggtgcgcgacctgaaggacctgctcgtgcgcttcccgggcgactccacc
gtctacctccacgtgggggagcaggtggtccgcctgcccgacggctggtcggtcgaccgg
ggctcggggctggtggccgagctgcgggtcgtcttcggcgccgactgcctcgtcggctga
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