Iamia majanohamensis: PO878_12955
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Entry
PO878_12955 CDS
T08795
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ima
Iamia majanohamensis
Brite
KEGG Orthology (KO) [BR:
ima00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ima03016
]
PO878_12955 (truB)
Enzymes [BR:
ima01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PO878_12955 (truB)
Transfer RNA biogenesis [BR:
ima03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PO878_12955 (truB)
Prokaryotic type
PO878_12955 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WCO65406
UniProt:
A0AAF0BQV1
LinkDB
All DBs
Position
complement(2746442..2747341)
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AA seq
299 aa
AA seq
DB search
MSKGGRPPGPDGVAVVDKPAGWTSHDVVARSRGLLGTRKVGHSGTLDPDATGVLVLGVGR
ATRLLRYLTALGKSYEAEVVLGTETSTLDAAGEVTATHDMAAVTLDDARRVAAEQLTGPI
LQVPPMVSAVKVDGRRLHELAREGIEVAREARPVTVHTFTLDEGPEPGVLRAAVACSSGT
YVRTLAADLGHALGGGAHLRALRRTSVGGFTLADAVALDALTPEDLLPVAAAVAHLPSVV
VDGDVAVAVGHGKVLDRPVLGVDGGEGPWAVLDPSGALLAVYADHRGGTVKPDLVIPAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaggggggccggccgccgggccccgacggggtggcggtggtcgacaagcccgcc
gggtggaccagccacgacgtggtggcccgctcgcgcgggctgctcggcacccgcaaggtc
ggccactccggcaccctcgaccccgacgccaccggcgtcctcgtgctgggcgtggggagg
gccacccgcctgctgcgctacctgaccgccctgggcaagtcctacgaggccgaggtcgtg
ctgggcaccgagacctcgaccctcgacgccgccggcgaggtcaccgccacccacgacatg
gccgccgtgaccctcgacgacgcccgccgggtcgcggccgagcagctcaccggccccatc
ctccaggtcccgcccatggtctcggccgtcaaggtcgacgggcggcgcctccacgagctg
gcccgcgagggcatcgaggtcgcgcgcgaggcccgtccggtcaccgtccacaccttcacc
ctcgacgagggaccggagcccggcgtcctgcgcgccgcggtggcctgctcgtcgggcacc
tacgtccgcaccctcgccgccgacctgggccacgccctcggcggcggcgcccacctgcgg
gccctgcgccgcacgtcggtgggcggcttcaccctcgccgacgccgtggccctcgacgcc
ctcacccccgaggacctgctgcccgtggccgccgccgtcgcccacctgccctcggtggtg
gtggacggcgacgtcgccgtcgccgtcggccacggcaaggtcctcgaccgcccggtgctc
ggcgtcgacgggggcgaggggccctgggccgtgctcgacccctccggggccctgctcgcg
gtctacgccgaccacaggggcggcaccgtgaagccggacctggtgatcccggccggctga
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