Iamia majanohamensis: PO878_14165
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Entry
PO878_14165 CDS
T08795
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ima
Iamia majanohamensis
Pathway
ima03030
DNA replication
ima03430
Mismatch repair
ima03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ima00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PO878_14165
03430 Mismatch repair
PO878_14165
03440 Homologous recombination
PO878_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ima03032
]
PO878_14165
03400 DNA repair and recombination proteins [BR:
ima03400
]
PO878_14165
Enzymes [BR:
ima01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PO878_14165
DNA replication proteins [BR:
ima03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PO878_14165
DNA repair and recombination proteins [BR:
ima03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PO878_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
UVR
GIY-YIG
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WCO65646
UniProt:
A0AAF0BQY8
LinkDB
All DBs
Position
2998160..2999965
Genome browser
AA seq
601 aa
AA seq
DB search
MAGSRTGTTGATGRAGGQASLDDLGTPLHDVTFCVLDIETTGGRADDGGITEVGAVRLRG
GECLGTFQTLVNPGLPIPPQITVLTGITDAMVVPAPRLGPVLAAFVEFVGDAVIVGHNVR
YDMGFLNAALEHHDRPRFANRVVDTCALARRLVRDEVPNCRLGTLASRLRLPHQPSHRAL
DDALATGDLLHVLLERASGLGVLGLDDLLALPTMAGHPQAAKLRLTEHLPRAPGVYRFRD
RGGRVLYVGKATDLRSRVRSYFSGDERRKVGQLLRETEAVDAVVCSSTLEAAVLELRLIR
ALDPRFNRQGRARGGQAWIRLTDEQFPRLSVVRTVKGPPADHLGPFPTHRAAARVVEALQ
SALPLRRCQGRPGSREAPCAPAQLGRALCPCAGDLDAEVYARVVDAVRTGWQRRPDLLLS
PLAEQMDRLARDERFEEAADVRDRAGAVVATLRRRRRVDALRASGRTELALPGGAGAVLE
GGVLTAAWGPDGQVRSLDLVAGVPPPADDGPDAPPSAALTAEVLCVAGWLDRAAGRVRVV
ESTGGLRSPWPALPDFAARRPRPTAVPATPPPDRSRPARPVAGRSGVATRRPALTTAGRR
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
gtggccgggagcaggacggggacgacgggggcgacggggagggccgggggccaggccagc
ctggacgacctcggcaccccgctgcacgacgtgaccttctgcgtgctcgacatcgagacc
accggcggccgggctgacgacgggggcatcaccgaggtcggggcggtgcggctgcgcggc
ggcgagtgcctgggcaccttccagacgctggtgaacccggggctgcccatcccgccccag
atcaccgtcctcaccggcatcaccgacgccatggtggtgcccgccccccgcctcggcccg
gtgctggccgccttcgtcgagttcgtgggcgacgcggtgatcgtcggccacaacgtccgc
tacgacatgggcttcctcaacgccgccctcgagcaccacgaccgcccccgcttcgccaac
cgggtcgtcgacacctgcgcgctggcccgccggctggtgcgcgacgaggtgcccaactgc
cgcctcggcaccctcgcctcccggctccgcctcccccaccagccctcgcaccgggccctc
gacgacgccctggccaccggcgacctgttgcacgtgctgctggagcgggcctccgggctc
ggcgtgctgggcctcgacgacctgctggccctgcccaccatggccgggcacccgcaggcg
gccaagctccgcctcaccgagcacctgccccgcgccccgggcgtgtaccgcttccgcgac
cggggcggccgggtgctctacgtcggcaaggccaccgacctccgctcccgggtccgctcg
tacttctcgggcgacgagcgccggaaggtgggccagctcctccgggagaccgaggcggtc
gacgccgtggtctgctccagcaccctggaggccgcggtcctcgagctgcggctcatccgg
gccctcgacccccgcttcaaccgccagggccgggcccgcggcggccaggcgtggatccgc
ctcaccgacgagcagttcccgcgcctgtcggtcgtgcgcacggtcaagggcccccctgcc
gaccacctgggaccgttccccacccaccgggccgcggcccgggtggtcgaggccctccag
tcggccctgccgctgcgccgctgccagggccggcccgggtcccgcgaggcgccgtgcgcc
ccggcccagctgggccgggccctgtgcccgtgcgccggcgacctcgacgccgaggtctac
gcccgggtcgtcgacgcggtgcgcaccggctggcagcgccggcccgacctcctgctgtcg
cccctggccgagcagatggaccgcctcgcccgcgacgagcgcttcgaggaggcggccgac
gtccgggaccgggccggcgccgtggtggccacgctccgccggcgccgccgggtggacgcc
ctccgggccagcgggcggaccgagctggccctgcccggcggggccggggccgtgctcgag
ggcggcgtgctcaccgcggcctgggggcccgacggccaggtccgctcgctcgacctggtg
gcgggggtgccgccccccgccgacgacggccccgacgcgccgccctccgccgccctcacc
gccgaggtgctgtgcgtcgcgggatggctcgaccgggccgccggccgggtgcgggtggtc
gagagcaccggcgggctgcgctcgccctggccggccctgcccgacttcgccgcccgccgg
ccccggcccacggcggtgccggcgacgccacccccggaccggtcacgcccggcacgaccg
gtcgccggccgcagcggggtcgcgacgcgccgacccgccctgaccaccgcgggccggcgc
cgctag
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