Iamia majanohamensis: PO878_19500
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Entry
PO878_19500 CDS
T08795
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ima
Iamia majanohamensis
Pathway
ima03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ima00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PO878_19500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ima03021
]
PO878_19500
03400 DNA repair and recombination proteins [BR:
ima03400
]
PO878_19500
Enzymes [BR:
ima01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PO878_19500
Transcription machinery [BR:
ima03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PO878_19500
DNA repair and recombination proteins [BR:
ima03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PO878_19500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
PBC
Motif
Other DBs
NCBI-ProteinID:
WCO66684
UniProt:
A0AAF0BVU0
LinkDB
All DBs
Position
complement(4112778..4116788)
Genome browser
AA seq
1336 aa
AA seq
DB search
MLDVNDFDQLKIGLATADSIRTWSNGEVKKPETINYRTLKPEKDGLFCEKIFGPTKDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVVHIWYLRGTRSWLAYLLMG
TEVKEELKAKQLEKVIYFAANLVTYVDEERRHEDMPNLEAEKVAEHEEITQQRDVELARM
LEDHEAEIAQLEADGAKESDIKTRRKSFEKDQATVREQYEEELERLDRAFDEFQKLFARQ
IIDDEMLWREIEYRYGDYFEGGMGADAIKQLIDRIDFDEEEVKLREALDPTDGRKPLSAQ
RKQKAVKRLKIVAAFNRRDDHARRVNDPRAMILDVVPVIPPELRPMVQLDGGRFATSDLN
DLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKS
LSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKIMALELFKPFVMKKLV
DAELAQNIKSAKRMVERRRPQVWDVLEEAIKEHPVMLNRAPTLHRLGIQAFEPVLVEGKA
IQIHPLVCTAFNADFDGDQMAVHLPLSAEAQAEARVLMLSANNVLSPAHGRPLVTPTQDM
IIGGYYLTEQVEGALGEGRTFRHLHEVERAYEEGHVALHATVTFRTVTTDDDGERRVEDL
ETTPGRLIFNAALPDDFRYVNERVDKKIMGSIVDELAHDFPKAVVAGSLDAIKNLCYRYA
TRSGITISVDDVKTPDAKAGILEEHEGRAQKVEDQFRRGIITDGERRQKEVEIWTAATDK
VRSEMEVGLRAEQFNPIEMMVGSGARGNMMQVRQIAGMRGLVANPRGDMIPRPIKSNFRE
GLAMLEYFIATPGARKGLVDTALRTADSGYLTRRLVDVAQELIIREDDCRHGGPARGTWI
EDVWPDGYFSTDGAYVGPTKQDPTDVMRRTYLETALFGRCLAVDVTLGDGTVVEADTPID
EHLMAALRDDETVSRVRVRSPLTCDAELGVCAKCYGRSLATGRSIELGEAVGVIAAQSIG
EPGTQLTMRTFHTGGVATGGGDIAGGLPRVVELFEARSPKGKATLVRTSGVIRMGDDEGK
GRVVTVVGDDGAEEVHTIPVQARLDVEEGQEVTAGTAIVPGPRDPKELLEIKGLRETQNY
LLAQVQKVYRDQGVSIHDKHIELIVRQMTRRVAVSDPGESEFLPDERIDRKAFRDTNRVL
VEEGKAPSEARDEIMGITKASLATDSWLSAASFQETTRVLTEAAIESRSDSLLGLKENII
IGKLIPAGTGMPEYRDVGTHAPEYEPMAFYSSDGEEFADEGFDASAYLANLRGTLEGTGA
DGSELASVPDTGTDAG
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgtcaacgacttcgaccagctgaagatcggcctcgccaccgcggacagcatc
cgcacgtggtccaacggcgaggtcaagaagcccgagaccatcaactaccgcacgctgaag
ccggagaaggacggcctcttctgcgagaagatcttcggtccgaccaaggactgggagtgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacccggtccaaggtgcgccgcgagcgcatgggccacatcgagctggccgcgccc
gtcgtccacatctggtacctgcgcggcacccgctcctggctcgcctacctcctcatgggc
accgaggtgaaggaggagctcaaggccaagcagctcgagaaggtcatctacttcgcggcc
aacctcgtcacctacgtcgacgaggagcgccgccacgaggacatgcccaacctcgaggcc
gagaaggtggccgagcacgaggagatcacccagcagcgcgacgtcgagctggcccgcatg
ctcgaggaccacgaggccgagatcgcccagctggaggcggacggggccaaggagtccgac
atcaagacccgtcgcaagtccttcgagaaggaccaggcgaccgtccgcgagcagtacgag
gaggagctcgagcgcctcgaccgggccttcgacgagttccagaagctcttcgcccgccag
atcatcgacgacgagatgctgtggcgcgagatcgagtaccgctacggcgactacttcgag
ggcggcatgggcgccgacgcgatcaagcagctcatcgaccgcatcgacttcgacgaggag
gaggtcaagctccgcgaggcgctcgaccccaccgacggccgcaagccgctgtcggcccag
cgcaagcagaaggcggtcaagcgcctgaagatcgtcgccgccttcaaccgccgcgacgac
cacgcccgtcgggtcaacgacccccgggccatgatcctcgacgtcgtgccggtgatcccg
cccgagctgcgcccgatggtgcagctcgacggtggccgcttcgccacctccgacctgaac
gacctgtaccgccgggtcatcaaccgcaacaaccggctcaagcgcctcctcgacctcggt
gcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtcgacgccctg
ttcgacaacggccgccgcggccggcccgtcaccgggcccggcaaccgcccgctcaagtcc
ctctccgacatgctgaagggcaagcagggccgcttccgccagaacctgctgggcaagcgg
gtcgactactccggccgttcggtcatcgtggtcggcccgaccctcaagctgcaccagtgc
ggcctgcccaagatcatggccctggagctgttcaagcccttcgtcatgaagaagctggtc
gacgccgagctggcccagaacatcaagtcggccaagcgcatggtcgagcgccggcggccc
caggtgtgggacgtgctcgaggaggccatcaaggagcacccggtcatgctgaaccgggcc
cccacgctgcaccgcctcggcatccaggccttcgagccggtcctcgtcgagggcaaggcc
atccagatccacccgctggtgtgcaccgccttcaacgccgacttcgacggcgaccagatg
gccgtgcacctgcccctgtcggccgaggcccaggccgaggcccgggtgctcatgctctcg
gccaacaacgtgctgtcgcccgcccacgggcgcccgctggtcacgcccacccaggacatg
atcatcggcgggtactacctgaccgagcaggtcgagggcgcgctcggcgaggggcgcacc
ttccgccacctccacgaggtggagcgggcctacgaggagggccacgtcgccctccacgcc
acggtcaccttccgcaccgtcaccaccgacgacgacggcgagcggcgggtcgaggacctg
gagaccaccccgggtcggctgatcttcaacgcggccctgcccgacgacttccgctacgtc
aacgagcgggtcgacaagaagatcatgggctcgatcgtcgacgagctggcccacgacttc
ccgaaggccgtggtcgccggcagcctcgacgccatcaagaacctctgctaccgctacgcg
acgcgctcgggcatcaccatctcggtcgacgacgtcaagacccccgacgccaaggccggc
atcctcgaggagcacgagggtcgggcccagaaggtcgaggaccagttccgtcggggcatc
atcaccgacggcgagcggcgccagaaggaggtcgagatctggaccgccgccaccgacaag
gtgcgcagcgagatggaggtcggcctccgggccgagcagttcaaccccatcgagatgatg
gtcggctccggcgcccgagggaacatgatgcaggtccgccagatcgccggcatgcgcggc
ctggtggccaacccccgtggcgacatgatcccccggcccatcaagtccaacttccgcgag
ggcctggcgatgctggagtacttcatcgccacgcccggcgcccggaaggggctggtcgac
accgccctccgcaccgccgactcgggctacctcacccggcgcctggtcgacgtggcccag
gagctcatcatccgggaggacgactgccgccacggcggtcccgcccgcggcacctggatc
gaggacgtgtggcccgacggctacttctcgaccgacggcgcctacgtcggcccgaccaag
caggacccgaccgacgtcatgcggcggacctacctggagacggcgctgttcggccgctgc
ctggcggtcgacgtgaccctcggcgacggcaccgtcgtcgaggccgacacgccgatcgac
gagcacctcatggccgccctgcgcgacgacgagaccgtctcccgcgtgcgggtccgctcg
ccgctgacctgcgacgccgagctcggcgtgtgcgccaagtgctacgggcgctcgctggcc
accggccggtcgatcgagctgggcgaggcggtgggcgtcatcgccgcccagtccatcggc
gagccgggcacccagctcaccatgcggaccttccacaccggcggcgtcgccaccggcggc
ggcgacatcgccggcggcctcccccgcgtggtggagctgttcgaggcccgcagcccgaag
ggcaaggccaccctggtccgcacctccggcgtcatccgcatgggcgacgacgagggcaag
ggccgggtcgtcaccgtcgtcggcgacgacggcgccgaggaggtccacaccatcccggtg
caggcccgcctcgacgtcgaggagggccaggaggtcacggccggcacggccatcgtcccc
gggccccgcgaccccaaggagctgctcgagatcaaggggctccgggagacccagaactac
ctgctggcccaggtccagaaggtgtaccgcgaccagggcgtgtcgatccacgacaagcac
atcgagctcatcgtgcgccagatgacccgccgggtggcggtgtcggaccccggcgagtcg
gagttcctgcccgacgagcggatcgaccgcaaggcgttccgcgacaccaaccgggtgctg
gtcgaggagggcaaggccccctcggaggcccgcgacgagatcatgggcatcaccaaggcg
tcgctggccaccgactcgtggctctcggccgcctccttccaggagacgacccgggtcctc
accgaggccgccatcgagtcccgctcggactcgctgctcggcctgaaggagaacatcatc
atcggcaagctcatccccgccgggacgggcatgcccgagtaccgcgacgtgggcacccac
gcccccgagtacgagccgatggcgttctactcctccgacggcgaggagttcgccgacgag
ggcttcgacgcctcggcctacctggccaacctgcggggcaccctcgagggcaccggggcc
gacggctccgagctggcctccgtgcccgacaccggcaccgacgccggctga
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