Imperialibacter sp. tig00000051: ACMVP2_03065
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Entry
ACMVP2_03065 CDS
T11152
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
imp Imperialibacter sp. tig00000051
Brite
KEGG Orthology (KO) [BR:
imp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
imp03032
]
ACMVP2_03065 (topA)
03400 DNA repair and recombination proteins [BR:
imp03400
]
ACMVP2_03065 (topA)
Enzymes [BR:
imp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACMVP2_03065 (topA)
DNA replication proteins [BR:
imp03032
]
Prokaryotic type
DNA Topoisomerases
ACMVP2_03065 (topA)
DNA repair and recombination proteins [BR:
imp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACMVP2_03065 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
GAPT
Motif
Other DBs
NCBI-ProteinID:
XOY61112
LinkDB
All DBs
Position
676503..678821
Genome browser
AA seq
772 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGKDYSVTSSYGHVRDLPKGDKAIDIKNGFKPTYEITADK
KDVIKQLKKLSKEAEMIYLASDDDREGEAISWHLKEALDLNDKNTRRIVFREITKKAIDN
AIQNPRGIDIDLVNAQQARRILDRLVGFELSPILWKKIKTGLSAGRVQSVAVRLVVERER
EVEHFNSESSLKITANFLLAGGKVLKAELGKKFKTEAEAQAFLEKCNGAEFSIKNLEKKP
TKRSPAPPFTTSTLQQEASRKLGFSVSQTMTIAQRLYESGKISYMRTDSLNLSDEAVSGA
TNEIKSSYGNDFVQNRKYKTKSESAQEAHEAIRPTDFSAHTAGAERNEQRLYDLIWKRAI
ASQMADAQIEKTIASIGISTTDEVLTATGEVIQFEGFLKVYIESTDDEEDEEEAKGMLPP
LKVGEKLTLREITGKESFTRPPTRYTEASLVKQLEEMGIGRPSTYAPTISTIQKREYVIK
ESRDGKERKYRELTLANGKITAKTGTENYGAEKMKLFPTNLAMVVNDFLVLHFPNVIDFT
FTARVEKEFDDIASGKVEWQTMIDSFYGKFHPRVESTEKVDRSEVGASKELGIDPASGKK
VTVRLGRFGPLAQIGEATEDEKPKYASLKKGQLMENITLEDALELFKLPREIGLFEEEPM
VAAIGRFGPYIRHKSQFYSLTKDFDPMTVTEEEAVLIIRAKRELEANRLIKKFTENEEVQ
VLNGRFGPYIKFGKQNVKIPKGKEPKELTYAECVELAEAAPAKKGGFKRKSK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaccttgtaatagtcgagtcgccagcaaaggcaaaaacaattgaaggatac
ttaggaaaggactattcagtgacgtcgagttacggccatgttcgtgacctgcccaaaggg
gacaaagcgattgacattaaaaatggttttaagccgacctacgaaataacggccgacaaa
aaagatgtcatcaaacagctgaaaaaattatcgaaggaagctgagatgatttacctggct
agtgacgatgaccgtgaaggagaagccatttcgtggcatttaaaggaggcgctggatctg
aacgacaagaacacaaggcggatcgttttcagggaaattaccaagaaggcgattgacaat
gctattcagaacccaagaggcattgatatcgatttggtaaatgcccagcaggcccgccgc
atacttgatcgtctggtaggtttcgagctttcccccattctctggaaaaaaataaaaact
ggtctctcagctggcagggtgcaatccgttgctgtacgccttgtggtggagcgagaaaga
gaagtcgaacattttaactccgagtcttctctcaaaatcacagccaattttctgcttgca
ggcggtaaagtattgaaagcggagcttggcaagaagtttaaaactgaagctgaagcacag
gcttttcttgaaaaatgtaacggcgcagagttctctatcaagaacctggagaaaaagccc
accaagagatcgcctgctcctccttttaccacctctaccctgcagcaggaggccagccgt
aagctgggcttctcggtgagtcaaaccatgaccatcgctcagcggctttatgagtcaggt
aaaatctcttatatgagaactgactcgctcaatctgtcagacgaagccgtcagcggtgcc
accaacgaaattaagtcttcgtatggcaacgattttgttcaaaacagaaagtataaaacc
aagtcagaaagtgctcaggaagctcacgaagccatcaggcctaccgacttctcagcgcac
accgccggtgctgaaagaaatgaacagcggctttatgacctgatctggaaacgagcgatt
gcctctcaaatggcggatgcacaaatagaaaaaaccatcgcttccattggcatttccact
accgatgaggtattgactgccactggagaagtgatccaatttgaaggcttccttaaggtg
tacatcgagtcgaccgacgacgaggaggatgaagaagaagcaaaaggcatgctgccacca
ttgaaggtcggtgaaaagctgactttaagggaaataactggcaaagaatcgtttacccga
cctcctacccggtacactgaagcaagcctggtaaaacagctggaagaaatgggcataggc
cgtccgtcgacctacgcacctaccatttcaacgatccaaaaaagagagtacgttattaaa
gagtctcgtgacggcaaggagagaaaatacagggagctgacgctggccaacggcaaaatc
acagccaaaaccggtactgaaaactacggcgccgaaaaaatgaagctcttccctaccaac
ctggccatggtggtcaacgacttcctggtgcttcatttccccaacgtgatcgacttcact
tttactgcccgggtggagaaagagtttgacgatatagcctctggcaaagtggaatggcaa
acaatgattgattccttctacggcaaatttcacccaagggtagaaagcaccgaaaaggtt
gaccggtcggaagtaggtgccagcaaagagctgggcattgacccggccagcggcaagaaa
gtgactgtcaggctaggtcgctttggtccgctggcccaaattggcgaagcaaccgaagac
gagaagcccaaatacgccagcctgaaaaaagggcagctgatggagaatataacattggag
gacgcccttgagctattcaagcttcccagagagattgggctgtttgaagaggaaccaatg
gtagctgctatcggcaggtttgggccttacattcgtcataaaagtcagttttactcgctt
accaaggattttgacccaatgacggtgaccgaagaagaggctgtattgatcatcagggct
aagagagaattggaagccaacaggctcatcaagaaattcactgaaaacgaagaagttcag
gtgctaaacggtcgctttggcccttacatcaagtttggcaaacaaaatgtgaaaatccca
aaaggcaaagagcccaaggagctgacctacgccgaatgcgtggagctggccgaagcagcg
ccagcaaaaaagggaggattcaagagaaagtccaagtag
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