Imperialibacter sp. tig00000051: ACMVP2_10185
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Entry
ACMVP2_10185 CDS
T11152
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
imp Imperialibacter sp. tig00000051
Pathway
imp03410
Base excision repair
imp03430
Mismatch repair
imp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
imp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACMVP2_10185 (recJ)
03430 Mismatch repair
ACMVP2_10185 (recJ)
03440 Homologous recombination
ACMVP2_10185 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
imp03400
]
ACMVP2_10185 (recJ)
DNA repair and recombination proteins [BR:
imp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACMVP2_10185 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACMVP2_10185 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACMVP2_10185 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XOY62495
LinkDB
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Position
2326464..2328164
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AA seq
566 aa
AA seq
DB search
MSKRWVYRDLPDPETVHSLASGIKVSDTLAALLVQRGYSTFEETRAFFRPHLGQLHDPFL
MKDMEKAVNRLSEAIFKKEKILIYGDYDVDGTTSVALAYGFLRKYHSNIDYYIPDRYDEG
YGISETGVRWAAEQGFTLVIALDCGIKAVSKVELANSLGVDFIICDHHLPGPELPKAFAV
LDPKRLDCDYPFDGLSGCGVGFKLMQAFAIQNTVDIQELYLYLDLVAVSIASDIVPVVGE
NRVLAYFGLQKLNKSPLPGLKALKNLSGIRGDVTVTRVVFGIGPRINAAGRIDHAGAAVE
LLLARTEEEAEELAAQLDIKNDLRKGFDENITKEALAIIEEEDQLKKSFSTVLYRENWHK
GVIGIVASRCIEKFYRPTIILTESNSKATGSARSVVGFDVYEAIAECADLLDQYGGHKYA
AGLTMNLDKVEAFKERFEEVVARRITPEMLEPIIDIDLAIPIEGINHKFFNILRQMAPFG
PGNMQPVFVSTNVVAKSVKQLKDIHLKMFLSQEGSKASLEAIAFGFGEYYDAIADGAPFN
VAYTIEENDFMGNKTMQLHIKDLKLD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaagatgggtatacagagacctacctgatcccgaaacagtgcattcgctggct
tctggcattaaggtgagcgataccctggcagcattgctggtgcaaagaggctattccaca
ttcgaagagacccgtgcctttttcaggccacacctcggccagctgcatgatccatttctg
atgaaggacatggaaaaggccgtgaacaggttgagcgaggcgattttcaaaaaagaaaaa
atccttatctatggcgactatgatgtggatggcaccacttctgtggcactggcttatggc
tttctccgtaagtatcattccaatattgactactacatccccgaccgttacgatgagggc
tatggcatctcagaaactggtgtccgctgggcggccgagcagggttttacgcttgtcatt
gcgctggactgtggcataaaagcagtttcgaaagtagagctggccaactccctgggggtc
gatttcatcatttgcgaccatcaccttccgggtcctgagctgcccaaggcatttgccgtc
cttgacccaaaacgcctcgattgcgattacccgtttgatgggctcagcggctgtggagtg
ggtttcaagctcatgcaggcctttgccattcagaacactgtcgacatccaggagctttat
ctctacctcgacctggtggctgtcagcattgcttccgacattgtacctgttgtaggcgaa
aacagggtgctggcctactttggcttgcagaagctcaataaatcgcctttgcctggcctg
aaagctttgaaaaacctttcgggtatccggggagatgttacagtgacccgggtagtcttt
ggcattgggcctcgcatcaacgccgccggtcgaatcgatcatgccggtgcggcagtggaa
ctattgctcgccagaacggaagaagaagctgaagagttggcagctcagcttgacatcaaa
aatgaccttagaaagggctttgacgaaaacattacaaaagaggcacttgcaataattgaa
gaagaagatcagctcaaaaaatctttttcgactgtgctttatagagaaaactggcacaag
ggcgttatagggattgtagcgtcccgttgcatagaaaagttttacaggccaaccattatc
ctgactgaatcaaatagcaaagcaacgggtagcgcccggtcagtggtgggcttcgatgtg
tacgaagccatagcagagtgtgctgacttactcgatcagtacggtggtcataagtacgcc
gccgggctaacaatgaatttggacaaggttgaggcctttaaggaacggtttgaagaggtg
gtggccagaagaattacgccagaaatgctggagccaatcattgacatcgacctggcgatt
ccaattgagggtatcaaccacaagtttttcaatatattaaggcaaatggctccttttggg
ccaggcaacatgcaaccggtgttcgtgtccaccaacgtagttgccaaatcggtaaagcag
ctgaaagacatacacctgaaaatgtttttgagccaggaaggctccaaggcttcgcttgaa
gcgattgcttttggatttggcgagtactacgatgctattgctgatggcgcacctttcaat
gtggcgtataccatcgaagagaatgactttatgggaaacaaaaccatgcaattacacatc
aaagatttgaagcttgattaa
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