Imperialibacter sp. tig00000051: ACMVP2_24915
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Entry
ACMVP2_24915 CDS
T11152
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
imp Imperialibacter sp. tig00000051
Pathway
imp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
imp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACMVP2_24915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
imp03021
]
ACMVP2_24915
Transcription machinery [BR:
imp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACMVP2_24915
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
DUF7443
Motif
Other DBs
NCBI-ProteinID:
XOY59730
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Position
5836145..5837008
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AA seq
287 aa
AA seq
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MRQLKISKQITNRESQSLDKYLQEIGKVDLITADEEVILAQKIREGDQIALEKLTKANLR
FVVSVAKQYQTGSLSLGDLISEGNVGLIKAAQRFDETRGFKFISYAVWWIRQSIMQALAE
QSRIVRLPLNRVGSLNKISKAFSDLEQKFQREPTAEELAEVLDVSLSEVLATQKVSGRQV
SIDAPFVSGEENGLLDVMVDENEERPDAGLMVASLQKEIQRCLSTLTAREAEVVSFYYGI
NGEQRMTLEEIGDKFNLTRERVRQIKETATRRLRSGTRSKILKSFLE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactcaaaataagtaaacagattaccaacagggagagtcagtctctcgacaag
tatttacaagaaattggaaaagtagacctcatcaccgcagacgaggaagtgatcttagcc
caaaagatcagagaaggagatcaaatagcacttgaaaaactaacaaaagccaatttgcgc
ttcgttgtttcggtagctaaacaatatcaaacaggcagccttagccttggagaccttatc
agtgagggcaacgtaggcttgatcaaagcggctcaacgttttgatgaaacccgtggtttc
aaattcatctcttacgctgtgtggtggattcgccagtctattatgcaggcgttggccgag
cagtcaagaattgtgcgtttgcctttgaacagggtagggtctttgaataaaatatcgaag
gcattttctgatctggagcaaaagtttcagcgtgaacctacggctgaggagttggccgaa
gtgcttgatgtcagtttgagcgaagtgcttgcaacacagaaagtgtcaggccgtcaggta
agtattgacgcaccatttgtgagtggtgaagaaaacggcttgcttgatgtgatggtggac
gaaaatgaagaaagacctgatgccggcctgatggtggcttctttgcaaaaagaaattcag
cgttgtttgtctacgcttactgccagagaagctgaggtagtatcgttctactatggtatt
aacggtgagcagcgcatgaccctggaggagattggagacaagttcaacctcactcgtgaa
agagttcgccagatcaaggaaactgctacccgcaggctccgtagtggcaccagaagcaaa
atattgaaatcgttcttggagtag
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