Ipomoea nil (Japanese morning glory): 109146527
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Entry
109146527 CDS
T04663
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
109146527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ini04131
]
109146527
03029 Mitochondrial biogenesis [BR:
ini03029
]
109146527
Membrane trafficking [BR:
ini04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109146527
Atg1 complex
109146527
Mitochondrial biogenesis [BR:
ini03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109146527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
109146527
NCBI-ProteinID:
XP_019149737
LinkDB
All DBs
Position
Un
AA seq
609 aa
AA seq
DB search
MDLHGNPQGEYGRFEQILSQFLLKSLHIILDSRVPVPSIRSYGHTREVKKSDKWFNIVLG
DRPAALDNLNFWHRNLMEPMIIDIILVQDKANSSAKQYSGTTLGDTFTETVIERWVVQYE
HPRSLPPQVGDSSYKKTYKKLIILLRSLYSMTRLLPAYKAFRKLSSSQSCDFDLNYKVSS
FSVPFSRAEEPLIKHYSFIPVDAQHGCFSLSLTYRENLSDFNLETSACFPPEIITDYVGS
PLADPMRSFPSTSSEKGVRATSYPLRRSQSSASGPFQRPHSWTSGLHKGPSLAQNEQSLG
SPPLYRSPYDLSSPPVNVHGRRISNSRFPTHHRTISSEDYQLSPPFSASPSPSLSPPTHV
SHGNPALSRLSSETSPVNIPHPMASRNSGFPSPNFSDPNRHSLPPQSPRSIKHDSSHHEF
PTGIRSLKKSDSTRAGESSSGTANLGLKVLRDAKDDSGRFSGLHSSSGSPRIGFSRSSSR
LSFPDDLDDYDFSCPFVVDDVDSQASQNLNAKKDSESPSQAFLGTRKSQDAAVGAVIQML
KTAPPLRQDSSCYSPSSVKIDPEGEIGTSSGFSAPRKISDAMEDLRAYKELKDLLLSKSA
TQSVRKADY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatttacatggaaatcctcagggtgagtatggaagatttgagcagattctttctcag
tttcttttgaagagtttgcatataatattggattcgagggttcctgttccttctatccga
tcttatggacataccagggaagtgaaaaagagtgacaagtggttcaatatagtgttggga
gatcgtcctgccgctcttgataatttgaatttttggcatagaaatttgatggagcctatg
attattgatattatacttgttcaagacaaggccaattcttcagcaaagcagtattcaggt
accacattaggggatacattcacagaaactgttatagagaggtgggttgttcaatatgag
catccgaggagtttgcctcctcaagtcggtgattcttcttacaagaaaacatacaagaaa
ctaattatacttttacggtccctttattcaatgacaaggctccttccagcttataaggcc
ttccggaaactatcttcttctcagagttgtgattttgatcttaattacaaggtctcttcg
ttttctgttccattctctagggcggaggaaccgttgataaaacattattcttttattccc
gttgatgctcaacatggttgtttttctttatctttgacatatcgtgaaaatctctctgac
ttcaacctggagacttctgcatgttttcctccagagattattacagattatgttggtagt
cctctcgctgatcctatgaggtcatttccttccacttcatcagagaagggtgtccgtgct
acatcatatccactaagacggtcacaatcatctgcctcaggaccatttcagcgtccccat
agttggacaagtggcctccacaaggggccctctttagctcagaatgaacaaagtctagga
tctccacctctgtatcgctcaccatatgacctatcatctccacctgttaatgtacatggc
agaaggatatcaaactccagatttcccactcaccatagaacaataagctctgaagattac
cagctttcaccaccattctcagcatctccatctccatcactgtcccctcctacacacgtc
tcacatggaaatcctgcattgtctcggttgtcttcagaaacttcccctgtcaatatccca
cacccaatggctagcagaaactctggattcccttctcctaacttttctgacccaaacagg
cactcacttccacctcaatcccccagaagcataaagcatgattcctcacatcatgaattc
cctactggaatcaggtcattaaagaaatcagattcaacaagggctggagagtcaagttct
gggactgcaaacctgggtctgaaggtgttaagagatgccaaagatgattcaggacgtttc
tctggtttgcattcttcaagtggttcaccacgtattggattctctaggagttctagtaga
ttatctttcccagacgacttggatgactatgatttttcttgtccatttgttgtcgatgat
gttgattcccaagccagtcaaaacctcaatgcaaagaaggactcagaatctccttcacaa
gcattcctaggaaccagaaaatctcaagatgctgctgttggtgcggttattcagatgctg
aagacagctcctccattacgccaagattctagctgttattccccatcttctgtgaaaatc
gatccggagggagaaattggtacttcttccgggttttctgctcctcgaaagatttcagat
gcaatggaggatctcagagcttacaaagaattaaaggatcttcttctttccaagagtgca
actcagtcggtccgcaaggcagattattga
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