KEGG   Ipomoea nil (Japanese morning glory): 109146965
Entry
109146965         CDS       T04663                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03030  DNA replication
ini03410  Base excision repair
ini03420  Nucleotide excision repair
ini03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109146965
   03410 Base excision repair
    109146965
   03420 Nucleotide excision repair
    109146965
   03430 Mismatch repair
    109146965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ini03032]
    109146965
   03036 Chromosome and associated proteins [BR:ini03036]
    109146965
   03400 DNA repair and recombination proteins [BR:ini03400]
    109146965
DNA replication proteins [BR:ini03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109146965
  DNA Replication Termination Factors
   ELG1-RFC complex
    109146965
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109146965
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109146965
  Check point factors
   HRAD17(Rad24)-RFC complex
    109146965
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 nSTAND_NTPase5 Mg_chelatase AAA_lid_RFC1 Rad17 AAA_16 Viral_helicase1 RuvB_N RCF1-5-like_lid AAA_11 AAA_5 AAA_19 AAA_assoc_2 AAA_25 nSTAND3 AAA_28 DNAX_ATPase_lid MeaB AAA_30 IstB_IS21 ABC_tran AAA_18 AAA_24 bpMoxR AAA_3 NTPase_1 RNA_helicase DUF815 DO-GTPase1 Rotavirus_VP3
Other DBs
NCBI-GeneID: 109146965
NCBI-ProteinID: XP_019150160
LinkDB
Position
Un
AA seq 331 aa
MASSSSVASGPDIPWVEKYRPTKVADIVGNEDAVARLQVIARDGNMPNLILAGPPGTGKT
TSILALAHELLGPNLKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEA
DSMTTGAQQALRRTMEIYSNSTRFGLACNTSSKVIEPIQSRCALVRFGRLSDQEILGRLM
VVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFGFINQENVFKVCDQPHPLHV
KNIVRNVLEGKFDDACVGLKALYDMGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLALARETAKAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcgtcatcttcttctgttgcgtcaggccctgacatcccatgggtcgagaagtacagg
cccaccaaggtggccgacatcgtcggcaacgaagacgccgtcgccaggctccaagtcatc
gcccgtgacggaaacatgcccaatctcattttagctggtcctcctggcactggtaaaact
accagtatacttgctcttgctcatgaacttctggggccaaatttgaaggaagcagttctg
gagctaaatgcatcagatgatagggggattgatgtcgttagaaacaagattaagatgttt
gctcaaaagaaagtcacgcttccccctggccgccataagattataattttggatgaagct
gacagcatgacaactggagctcaacaagccttaaggaggacgatggaaatatattctaac
tctactcgctttggtcttgcctgcaacacttcttctaaagtcattgagcctatccagagt
agatgtgccctagtccggtttggcagattatctgatcaagagatccttggacgacttatg
gtagtggttgctgcagaaaaggttccttatgtaccagaaggtcttgaggcaattatattt
actgctgatggagatatgagacaggctttaaataacctgcaagcgacatacagtggattc
gggttcatcaaccaagaaaatgttttcaaggtatgtgaccaaccccatccccttcacgtg
aagaatattgtacgcaatgtacttgaagggaaatttgacgatgcttgtgtgggtttaaag
gcgctctatgatatgggctattctcccactgacattatcacaacccttttccggattata
aagaactatgatatggcagaatacctgaaattggaattcatgaaggaaactggatttgca
catatgaggatctgcgatggagtgggatcgtatcttcagctatgcggtctgctagccaaa
cttgcattggctcgggagactgcaaaggcagcatga

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