Ipomoea nil (Japanese morning glory): 109148124
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Entry
109148124 CDS
T04663
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03030
DNA replication
ini03420
Nucleotide excision repair
ini03430
Mismatch repair
ini03440
Homologous recombination
ini03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109148124
03420 Nucleotide excision repair
109148124
03430 Mismatch repair
109148124
03440 Homologous recombination
109148124
03460 Fanconi anemia pathway
109148124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ini03000
]
109148124
03032 DNA replication proteins [BR:
ini03032
]
109148124
03400 DNA repair and recombination proteins [BR:
ini03400
]
109148124
Transcription factors [BR:
ini03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109148124
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109148124
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109148124
MMR (mismatch excision repair)
109148124
DSBR (double strand breaks repair)
HR (homologous recombination)
109148124
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
109148124
NCBI-ProteinID:
XP_019151453
LinkDB
All DBs
Position
Un
AA seq
635 aa
AA seq
DB search
MPPVNLTANAIQAINAGDVNSKPLVQVLDIKLIGSTQERYRLLLSDSVSTQHAMLATQLN
DRVKTGRVRTGSVVQLIDYICSTVQNRKIVVILNMETIIPDCETIGNPKVHLETDLGNQK
PTPNRTSGPSLFNGNSNMAAQSSRQTSIANSNNLSSQSVANNFQSNRPIIQPAYQPPPNY
KGHGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFDLLDS
EGGEIRVTCFNAVLDRFYDKIEVGKVYIISKGSLKPAQKNFNHLKNEWEILLETSSTVDQ
CPDEDPSIPRQQFSFRPISEIESVENNSILDVIGIVISVNPSVPILRKNGMETQRRILNL
KDQSGRCVELTLWGDFCNREGQQLQEMVDSGFFPVLAVKAGKVNDFSGKSIGTISATQLF
INPDFPEAFSLRQWFDQGGKDVASHSISRELMPSISKNEIRKTISQIKDEGLGRSDKPDW
VTVKATLTFIKTDTFCYTACPLMIGDRQCNKKVTKSGNSRWICDRCNQEFEECDYRYLIQ
GQIQDHTGLTWVTAFQESGEELLGCSAKELYMMKCDEEDDTRFSEIIKKCIFTQFLFRLK
IKEENYGDEQRVKITVVKADRVDHSRESRYLLDLL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggtgaatttaacggcgaatgcgatccaggctatcaacgccggcgacgtcaac
tccaagccgctggtccaggttttggatatcaagctcattggcagcacgcaggagcgttac
cgcctcctgctctccgattcagtttcgactcagcacgcgatgctcgctactcagctcaat
gaccgagtcaaaactggccgcgtccgcaccggttccgttgtccagttgatcgattacatc
tgcagcactgttcaaaatcgcaagattgttgtcatcctcaatatggaaactatcatacca
gactgtgaaacaattgggaatccaaaagtacatttagaaactgatttaggaaatcagaaa
ccaactcccaacagaacttctgggccttcattgttcaacgggaatagcaatatggctgct
caaagttccaggcaaacaagcattgccaacagcaacaatttgagctcccaaagtgttgcc
aataattttcagagcaaccgcccaattattcaaccagcataccaaccacctccaaactat
aaaggccatggggcaatcatgaaaaatgaagcaccagcacgcatcattcctattgctgct
ttgaatccctatcagggtcgatgggctattaaggctagggtgactgcaaaaggtgatatt
cgtcgctacaacaatgctaggggagatggaaaagttttctcatttgatctccttgattct
gaaggtggagaaatacgtgtaacctgcttcaatgctgttcttgaccggttttatgataaa
attgaagttgggaaagtttacattatatcaaaaggcagcttaaaacctgcacagaagaac
tttaaccatctcaagaatgagtgggagatactgttggaaacatcttcaacggtggaccaa
tgtccagatgaagacccttcaatacctagacaacagttctcttttaggcctattagtgaa
attgagagtgttgaaaacaattccatactagatgtaattggaattgtaataagtgtgaat
ccttctgttcccatcctgcgcaagaatggaatggagactcaaagaagaatcctgaatctg
aaggatcaatctggtcggtgtgtggaattgacactttggggagatttctgtaacagagag
gggcaacaactgcaggaaatggtagactctggtttcttccctgttttagcagtcaaagcc
ggaaaagtaaatgatttcagtggaaagtctataggaacaatctctgcgactcagcttttc
ataaatccagattttcctgaggctttcagccttaggcaatggtttgaccaaggaggaaaa
gatgtagcttcacattctatatctagggaacttatgccttcaatttcaaagaatgagata
cgtaaaactatctctcagataaaggatgaaggccttggaaggtcagataagccagactgg
gttacagttaaggcaacgttgactttcatcaagactgataccttctgttacaccgcgtgc
cccttgatgattggagatagacagtgtaacaaaaaagttactaagtcaggaaattcaaga
tggatatgtgaccggtgcaatcaagaatttgaggagtgtgattacaggtaccttattcaa
ggtcaaattcaggatcatactgggctaacgtgggtaactgccttccaggaatcaggggaa
gagcttttgggttgctcagctaaggagttgtacatgatgaagtgtgatgaggaggatgat
accagattctccgaaattataaaaaaatgcatcttcacacagtttctgtttagacttaaa
atcaaagaggaaaactatggtgatgaacaaagggtaaagattacagttgtcaaggctgac
agagttgatcattctcgggaaagtaggtatctgctagatttactgtaa
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