KEGG   Ipomoea nil (Japanese morning glory): 109148855
Entry
109148855         CDS       T04663                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ini03041]
    109148855
Spliceosome [BR:ini03041]
 Complex B
  Other components
   Complex B specific factors
    109148855
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 LisH_TPL Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd DUF7165 Beta-prop_HPS5 VPS8_N Mala_s_1-like Beta-prop_LRRK2 zf_topless Beta-prop_IFT122_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 109148855
NCBI-ProteinID: XP_019152155
LinkDB
Position
Un
AA seq 514 aa
MSSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETFVADINGGRWDA
VLPQVSQLKLPRKILEDLYEQIVLEMIELREIDTARAILRQTQVMGVMKQEQPERYLRLE
HLLVRTYFDPHEAYQDSTKEKRRAQIGQALATEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDEEDMYPTTLGHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIE
VWDHISGKLKKDLQYQADETFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSQGVTSLVFSRDGSQILSASFDSTARIHGLKSGKLLKEFRGHTSYVNDGIFTN
DGSRVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVHLYPKNTDHIVVCNKT
SSIYLMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSCQSGKLEHL
MKVHEKDVIGITHHPHINLVATYGEDCTMKLWKP
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgtcgtccacccttgaaatagaagctcgagatgtaattaagatagttcttcaattctgc
aaagaaaattctttgcatcaaactttccaaacattacaaaatgagtgccaggtttctctc
aacacagtggatagccttgaaacttttgttgctgatattaatggtgggcgatgggatgca
gtattacctcaggtctcacagctcaagcttcctagaaaaatactcgaggatttgtatgag
cagattgttttagaaatgatagaactccgggagatagatactgcacgtgctattttgagg
caaacacaagtgatgggtgtcatgaagcaggaacaaccagagagatatctacgacttgag
catctattagttcggacttactttgacccgcatgaggcttatcaagattcaacaaaagag
aaaaggcgtgcacaaataggccaagctcttgctacagaggtttctgttgtccctccttca
cgactaatggctttgatcggtcaagctttgaagtggcagcagcatcaaggattacttcca
cctggaacacaatttgacttgttccggggaacagctgctatgaaacaagatgaagaggat
atgtatcccacaactcttgggcacactattaagtttgggaagaaaagccacccagaatgt
gctaggttctccccagatggacaattccttgtttcctgctctgttgatggatttattgag
gtatgggaccacataagtggaaaattaaagaaggatcttcagtatcaggctgatgaaaca
tttatgatgcatgatgatgctgtgctttgtgttgattttagcagagactctgagatgctt
gcatctggatctcaagatggaaaaataaaggtgtggcgtataagaactggtcagtgcttg
cgccgtcttgaacgggcacattctcagggtgtcactagtcttgtcttctctagagatgga
agtcagatcttgagcgcatcgtttgacagcactgccagaatccatggcctgaaatcgggg
aaattattaaaagaattccgtggccacacatcttatgtgaatgatggtatttttactaat
gatggatctcgagtcatcacggcatctagtgattgcacagtgaaggtttgggatttgaag
accacagactgtctacagaccttcaaacctccacctcctttgaggggaggcgatgcatct
gtaaattctgttcatctttatcccaagaatacagatcatatagttgtgtgtaacaagaca
tcatcaatatacctgatgacccttcaagggcaggttgtgaaaagtttctcatctggtaag
agagaaggcggtgattttgtggcagcctgtgtatcgcccaaaggagaatggatatactgt
gtcggtgaagacagaaacctgtactgctttagctgtcaatctggcaaactggaacatttg
atgaaggtgcatgagaaggatgtgattggtatcactcaccatccccatataaatcttgtt
gccacttacggtgaagactgtaccatgaaattatggaagccgtag

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