Ipomoea nil (Japanese morning glory): 109148959
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Entry
109148959 CDS
T04663
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ini03400
]
109148959
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109148959
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109148959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
RQC
SecA_DEAD
DUF4349
Motif
Other DBs
NCBI-GeneID:
109148959
NCBI-ProteinID:
XP_019152480
LinkDB
All DBs
Position
Un
AA seq
707 aa
AA seq
DB search
MESNTTDDVLEELLSIEVELQDVQDQIKLLLDQQEKLQNRQSELKALLESHESSRSSSCN
DNTTVSREDWSRAFPWDSQADDIRFNVFGISKYRANQREIINAIMTGRDVLVIMAAGGGK
SLCYQLPAVLRNGVALVVSPLLSLIQDQVMGLTAIGIPAFMLTSLTTKDDEKFIYKALEK
GEGELKILYVTPEKISKSKRFMSKLEKCHNAGRLSMISIDEAHCCSQWGHDFRPDYKNLG
ILKTQFPNVPMVALTATATRTVQDDLMEMLHIPRCIKFVSTVNRPNLFYMVREKSSIGKA
VIDEIAEYIQTSYPNNESGIVYCFSRKECEQVARELHQRGISADYYHADMDVYAREKVHL
RWSSGKLQVIVATVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYF
RPADVPRQSSMVFYENSGLKNLYSTVRYCQSKRECRRSAFFRHFAEALQECNGMCDNCAF
SCEVKELDVSGHAKLIVSFVQEVQETDKRVTMLQLVEKVKGLLNGIDPELKRDELEQVVI
QLIVDHVLKEEFQHTAYATNAYVTVGALAKQLLQGKKVIKLEVCNKQVGSSSFIKSSKRS
RSSGLESMLDELRKELAAIHGSMFPHSVLSTQQICTISMQKPDSVEELEKIIGKLKVEKY
GSRILQEIKSYESKPEAVESVDGEEGASKKLKSRKKALVVIESSEEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaacacaactgatgatgttttggaagagcttctcagcattgaagttgagctt
caagatgtccaagaccaaataaagttattgcttgatcaacaagagaaattgcaaaacaga
caatctgaacttaaggctttgttagaaagccatgaatcatctagaagcagctcttgcaat
gataacactactgtttcaagagaggactggtcaagagcattcccatgggattctcaagct
gatgatattaggttcaatgtttttggaatatccaaataccgtgctaatcagcgagagatt
attaatgcaatcatgactggaagagatgtcctggtaattatggctgctggtgggggaaag
agtctgtgttaccaactcccagcggttctccgaaatggagtggctcttgttgtcagccct
ttgctttctcttattcaggatcaggttatggggttgactgcaataggcatcccagctttc
atgttgacctcactgacaactaaggatgatgagaagttcatatacaaggcccttgaaaag
ggtgaaggagagcttaagattttgtatgtcaccccagaaaagatatcaaagagcaaaagg
tttatgtcaaaacttgaaaagtgtcacaatgctggtcgtctttccatgatttccattgat
gaggcacattgttgcagccaatggggtcatgatttccgtcctgactacaagaatctcgga
atattaaagactcagtttcctaatgtccccatggttgccttgaccgccactgctactagg
acagtgcaagatgatctgatggagatgcttcatattccaagatgcataaaatttgttagt
acagtgaacaggccaaacctcttttatatggtacgagagaagtcatccattggaaaggct
gtcattgatgaaattgcagaatatattcaaacatcatatccgaataacgaatctgggata
gtgtattgcttctccagaaaggaatgcgaacaggttgctcgtgaattgcatcaaagagga
atttcagctgattattaccatgctgatatggatgtatatgctcgtgaaaaagttcatcta
aggtggagcagtggaaagctacaggttattgttgcaacggtggcgtttggtatggggatc
aacaaacctgatgtcaggtttgttatccatcacagcttaagcaaatcaatggagacttac
taccaggaaagtggtcgagctggaagagatggacttccttcagaatgtgtactttacttt
agacctgctgacgttcccagacagagttcaatggtcttctatgaaaattctggattaaaa
aacctttacagcacagtaagatattgtcagtctaaaagagagtgtcgccgaagtgccttc
ttccggcattttgctgaagctttacaagaatgcaatggaatgtgtgacaactgtgctttc
tcatgtgaggtgaaagaattggatgtctctggtcatgcaaaacttattgtttcttttgtg
caagaagtgcaagaaacagataagagggtgacaatgttgcaattggtggaaaaagttaag
ggtttgctcaatggtatagatcccgagctaaaaagagatgagctggagcaagttgtcatt
cagcttatagtagaccatgttttgaaagaagaatttcagcatactgcttatgctacgaat
gcttatgtgacagtaggagcacttgcaaagcaattattgcaagggaagaaagttattaag
cttgaagtttgtaataaacaagtgggtagctcaagtttcataaaatcatccaaaagaagc
agatcttctggattggaatctatgcttgatgaactacgaaaggaactcgctgccatccat
gggtcaatgtttccacactctgtattatcaacgcaacagatctgcactattagtatgcag
aaacccgattcagtggaagagctggagaagataattggaaaattgaaggttgagaaatat
ggaagcagaattcttcaagaaataaaaagttacgagtccaagcctgaagctgtggaaagt
gtagatggtgaagagggtgcttcaaaaaaattgaaaagtagaaaaaaagctttagtagtc
attgagagcagtgaagaagagtga
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