Ipomoea nil (Japanese morning glory): 109149339 Help Entry 109149339         CDS       T04663                                  Name (RefSeq) uncharacterized LOC109149339   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03018   RNA degradation Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109149339  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109149339 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109149339   mRNA degradation factors    5'-3' decay     Decapping complex      109149339 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  109149339 NCBI-ProteinID:  XP_019152601 LinkDB All DBs Position Un AA seq 817 aa AA seqDB search MERSSGRDFKDFTDSSSSASDSGVFNASQYAFFGRDIAEEIELGGLEDEEVREDTSSSGA PVAGGFGGGDDGVHEYHLFEKEEGSGLGSLSDLDDLATTFLKLNRVVAGPRHPGVIGDRG SGSFSRESSSTADWAKDADLPDWLDQHFSDTECYRETKRWSSQPHLSSIHLSESKPLYRT SSYPEQQPQQLQHCSSEPISVPKSAFTSFPPGGRSQQGSPRGFSQHRNISSLGHQSPFSA TNLSSLSNSNVHLSGFSHGLQYGNMPQLTSPGFSVNNHLQNSWANHSNLFHGDHSSLSNN SLPHQFLQHNVLFSPQLMSSQQRRLHLSAQASLPHFPVMQSQLHNSLSAPSHLGKYVLSD VKDSRPKSHKGKSVRFAQQGPDSGSQKNESSVLQFKSKYMTGEEIENILRMQHAGTHCND PYIDDYYHQARLAKKAAESRAKYRLCPNKEQPSRSRNSTELLPHLRVDSQGRVSFSSIRR PSSLLEANPPGSSVCGSSEQKVQETPLEQDPKFAARITIEDSFYLLLEVDDIDRLLQFSQ PQDGGAQLRRKRQMLLEGMAASLQLVDPLGKTSGPSELSPRDDIVFLWLVSIPKGQKLIS RYLQLLIPGGDLARIVCMAIFRHLRFLFGGLSCEHGAGETISNLAKTVSTCVSGMDLNSL SACLAAVVCSSEQPPLRPLGSPAGDGASLILKSVLERASYLLTDPQAANSFSMPNPALWQ ASFDAFFKLLTKYCVCKFDNIMQAVAQTETSTDVISPEVARAINSEMPVELLRASLPHTN ELQRKMLMNFGQGSIPLAGFNSRGGSSRKINAESVSC NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt atggagagatcctctggacgggatttcaaggacttcaccgactcctctagttccgcttct gatagtggagttttcaacgcttctcaatatgccttcttcgggcgggacattgcggaggaa attgagttgggcggtttagaggatgaggaggtgcgggaggatactagtagtagcggtgct cccgttgccggaggatttggcggtggcgatgatggggtgcatgagtatcatttatttgag aaagaagagggatctggactaggatctttatctgatttagatgacctagcaacaaccttt ttgaagttgaacagagttgttgcaggtccaaggcatcctggggttattggtgaccgtgga tcgggatctttttcaagggaaagttcatctacagctgactgggcaaaagatgctgatctt cctgactggcttgatcaacatttctctgatactgaatgttacagggaaaccaaaagatgg tcttctcagccacacctctcttctatacatctttcggagtcaaaaccactttatagaacg tcttcatatcctgagcagcaaccacagcagctacaacactgctccagtgaacctatttca gtaccaaaatctgcttttacttcctttcctcctggtggcagatctcaacagggttcacca cgtggcttttcccaacaccgtaatatttcctcacttgggcatcagtcaccattctctgct acaaatttgtcttctctgtcaaattctaatgtgcatctgtctggcttttctcatgggctt cagtatggaaatatgccccaattaacctctcctggtttctctgtaaataaccacctacaa aacagttgggccaaccattcaaacctattccatggtgatcattctagtctctcaaacaac agtttgccacatcaattcctgcagcacaatgtgctattttcacctcagttgatgtcctcc cagcagagaagactacatctttctgctcaagcatctcttccccattttccagtaatgcag tcccaattgcataattctctttctgcgccatctcacctgggtaaatatgtactatctgat gtgaaagattcaagacctaaatcacataaaggtaaaagtgtgcgatttgctcaacaaggc cctgattcaggtagccagaagaatgaaagtagtgtcttgcagttcaaatccaagtatatg acaggtgaagaaatagaaaatattctcagaatgcagcatgctggaacgcattgcaatgat ccatatatagatgattattaccaccaagctcgacttgctaagaaggcagctgagtctaga gcaaaatatcgtctctgtccaaacaaggagcaaccgtcacggtctcgtaatagcacagag ttactgcctcatctacgcgttgattctcaaggacgggtttccttttcttccattcgtagg ccgagctctcttcttgaagccaatccaccaggctcttctgtttgtggcagtagtgagcag aaagtacaagagacccctttggagcaggaccctaagtttgctgctagaattacaatagag gatagtttctatcttcttcttgaggttgatgacattgaccggcttcttcaatttagtcag ccacaagatggaggtgctcagcttaggcgaaagaggcagatgcttctggaaggtatggca gcttcacttcaacttgttgacccacttggaaaaactagcggcccatctgagctgagtcca agggatgacattgtgtttctatggttggtctctattcccaagggccagaaactcatttca agataccttcagcttctcattcctggtggagatcttgctaggatcgtttgcatggcaatt tttcgtcatctaaggtttttatttggtggtctatcatgtgagcatggggcaggtgagacc atttctaatcttgcaaagacagtgtcaacctgtgtcagtggtatggatcttaattcactt agtgcttgtctagctgctgtagtatgttcctcagagcaaccacctctccgcccacttgga agccctgctggggatggggcctcgctcatcttaaaatctgttctggaaagggcatcttac ctgttaactgatcctcaggctgcaaacagcttcagcatgcctaaccctgccctatggcag gcatcatttgatgcctttttcaaacttcttacgaaatattgtgtttgtaaatttgataat ataatgcaagcagttgcacagacagaaacaagcacagacgtaattagtccagaggtagca agggccataaacagtgaaatgcctgtggaacttttacgtgctagccttccccacacaaat gagctccagaggaagatgttaatgaattttggccagggttccatacctcttgcaggattc aactctcgtggtggaagcagcagaaaaataaatgctgagtctgtgagctgttag

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