Ipomoea nil (Japanese morning glory): 109149437
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Entry
109149437 CDS
T04663
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109149437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109149437
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109149437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_DCAF12
WD_LRWD1
Utp13
Motif
Other DBs
NCBI-GeneID:
109149437
NCBI-ProteinID:
XP_019152751
LinkDB
All DBs
Position
Un
AA seq
523 aa
AA seq
DB search
MVDDRAFPVKPKLKPTTRKSTSTPESKYWKSFKTPKELPAQTPASGITSIAFSPTSPYDF
AATHSASVSIFSAQTFERRAISSAFSDTATTAAFRSDGRLLAAGDLSGGVHVFDLNSRVP
LRRLRGHSRPVRVVRYPRADKLHLFSGGDDAVVKYWDVTTETRIYDLLGHKDYVRCGDCS
PVSDDMFISGSYDHTVQVWDVRVMNSGSVMKINHGKPVEDVIYLPSGGLIATAGGNSVKI
WDVIGGGGLLHEMESHNKTVTSLCVGRIGKETGEEAHQYRILSVSLDGYMKVFDYSKFKI
THSMRFPNPLLSVAFSPDCSTRVIGTSNGLLYIGKRKAKDSAGEELGSSMGFGAVEAPHR
RALRVRYFQRGQNEKPSEGDYLVMRPKKVKLAEYDKMFMKFMHKEALLAALNAKNPDTVV
AVMEELVARKKLLKCVSNLDNEELGLLLKFLQRYLTMPRYAGFLMALSKKVIDLRGEDIK
ASDALKGHIRNLKRDVEEEIRIQQTLQEIQGIVSPLLKIAARR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgacagagctttccctgtgaagcctaagctcaagcctactactcgcaagtct
acgtcaactccagaatccaaatactggaaatcattcaaaaccccaaaggaactcccggcc
caaaccccggcttccggcataacctccatcgcattctcccctacctcgccttatgacttc
gcggccacgcactctgcttcggtgtccatcttctccgcgcagactttcgaacgtagggcc
atctcctccgccttctctgacactgccaccaccgccgctttccgctctgacggtcgcctc
cttgctgccggtgatctttctggtggggtccacgtctttgacctcaactcccgagtcccg
ttgcgtcgcctccgcggccactcgcgcccggttcgcgtcgtccgctatccccgagcggac
aagctccacctcttctccggtggcgatgatgcggttgtcaagtactgggatgtcactact
gagactcgaatttacgatcttttgggccataaggactatgtcaggtgcggcgactgctct
ccagtaagcgatgacatgtttatttccggttcatatgatcatactgttcaggtttgggat
gttagggtaatgaactcaggctccgtgatgaaaattaaccatggaaagccggttgaggat
gtaatttacttgccatccggggggttaattgcaactgctggtgggaattctgtgaaaatt
tgggatgttattgggggtggggggttgttgcatgagatggagagtcacaacaagactgta
acttctctttgcgttgggagaattgggaaagaaaccggagaagaggctcatcagtatcgc
attttgagtgtttcattggatgggtacatgaaagtttttgattattccaagttcaagatt
acccattctatgaggttcccaaacccacttttgtcagttgccttctcaccagattgctct
acgagggtgattgggacttcaaatggacttctctatattgggaagagaaaggctaaggat
agcgctggtgaagaattggggagttctatgggttttggtgctgtagaggcacctcatagg
cgggcattgagggttaggtacttccagagggggcaaaatgagaagccctcggaaggggat
tacttggttatgaggccgaagaaagtaaagttggcagagtacgataagatgttcatgaaa
tttatgcataaggaggccttgttagctgctttaaatgcaaaaaacccagatactgtggta
gctgttatggaggagttggtagccaggaagaaattgttgaaatgtgtctcaaatttggac
aatgaggagcttggtttgctgttgaagtttcttcagcggtacttgacaatgcctagatat
gcagggtttttgatggcattgtccaagaaagttattgatttaaggggtgaggatattaaa
gcctctgatgcgttgaagggccacattaggaacctaaagcgagatgtcgaggaagaaatt
agaatacaacagactttgcaagagatacagggtatagtttcccccttgttaaagattgct
gcaagaagatga
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