KEGG   Ipomoea nil (Japanese morning glory): 109150517
Entry
109150517         CDS       T04663                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109150517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109150517
   03041 Spliceosome [BR:ini03041]
    109150517
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109150517
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109150517
Spliceosome [BR:ini03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109150517
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 LicP_NPro
Other DBs
NCBI-GeneID: 109150517
NCBI-ProteinID: XP_019153988
LinkDB
Position
Un
AA seq 450 aa
MDFMKKRKLEDNGVVSDPSFLPRLSLEDARKILESFTRDQLFEIVQNAVVRHPDVLGAVR
SIADQDTTQRKLFIRGLGWETTTDKLRSLFSTYGELEEAVVILDKATGKSKGYGFITFKH
IDGALLALKEPSKQIDGRMTVTQLAAAGMQGGPGGGSSNNPVDISLRKIYVGNVPYDMPT
ERLLQQFSMYGEIEEGPLGFDKVTGKSKGYALFVYKTAEAARASIMEPVKNIDGKQLNCK
LAIDGKKGKSGPSGPGGAQGPREGFGNDIGLGMQNGIGAQYGGPGGIHSGAGAFSGAMAT
LGGVSGSGVNLNGPGLPSIGNQAGVSPMVGGGSGPYNRSHFSIGGSTGYAGFSASTGGLG
GVTNGYGAPGAGSGLPSVGGGLGAATGRGPSSYALPQSSAGMPSGDYHSQGMHYNMPSSG
NQNRQNQQAGASPVPRVMHGGMYQGMPSYY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggacttcatgaaaaaacggaagctcgaagacaacggcgttgtttctgacccctccttt
ctccccaggctgtcgctcgaagacgcgcgcaaaatcctcgaatccttcacgcgcgaccag
ctcttcgagatcgtccagaacgcagttgttcgtcaccctgacgtcctcggcgccgtccgt
tcaattgccgaccaagacacgacgcagcggaagcttttcattcgcggcctcggttgggaa
actaccaccgataagcttcgttcccttttctccacctacggcgagcttgaggaggccgtg
gtaatcctcgataaggctactggaaagagtaaaggttacggctttatcacctttaaacat
attgatggagccctgcttgctctaaaggaacccagtaagcaaattgatggtcgaatgact
gtcacacagctggcagctgccggtatgcagggtgggcctggaggtgggagctcgaataat
cctgtggatatatcattgaggaagatatatgtggggaatgtgccttatgatatgcccacg
gagagattgttgcagcagttctcaatgtatggggagatagaggaagggccactaggattt
gataaggtgaccggtaagtctaaagggtatgctctattcgtgtacaagacagcagaggct
gcaagggcatctataatggaacctgttaagaatattgatgggaagcagttaaactgtaag
ctggcaattgatggtaagaaagggaaatctgggccttcaggcccaggaggagctcagggt
ccaagggaggggtttggtaatgatattggtttgggaatgcagaatggcataggggcacaa
tatggaggcccgggaggaattcattcgggtgccggagcgttctctggagctatggcaaca
ttgggtggtgtaagtggcagtggtgttaacttgaatggtccgggattgccatccattggg
aatcaagctggagtgtcccctatggttggtggtggttctggtccttacaacaggtcacat
tttagcattggtggttcaactggatatgctggctttagtgcatcaactggtggtttaggt
ggagtcacgaatggatatggagcccccggtgctggtagtggattacctagtgttggtggt
ggattaggtgctgccactggccgtggcccgtcttcatatgcattaccccaaagctcagct
ggcatgccttcaggagattatcattcacaaggtatgcattacaatatgccttcctctgga
aatcaaaaccgacagaatcaacaagctggagcatcaccagtgcctagagttatgcatggg
ggcatgtaccaagggatgccttcttactattga

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