Ipomoea nil (Japanese morning glory): 109151294
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Entry
109151294 CDS
T04663
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109151294
03036 Chromosome and associated proteins [BR:
ini03036
]
109151294
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109151294
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
Helicases
109151294
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109151294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
YgbB
Motif
Other DBs
NCBI-GeneID:
109151294
NCBI-ProteinID:
XP_019154773
LinkDB
All DBs
Position
Un
AA seq
697 aa
AA seq
DB search
MPSVIVAEAMASEESLKDLKKKGKKTPKPAAETLDSEKKKSRHSKVDSESDPEGSSAEKK
RSKKKEKKRKAAEIDSGDEQGSESSELVEPVNFKAEKKKKAKLMEAVGGDEEEEDPYAIT
NFRISKPLREALKAKGIESLFKIQAMTFEAVLDGTDMVGRARTGQGKTLAFVLPILESLT
NGPAKATRKTGYGRPPSVLVLLPTRELALQVFTDFEMYGGALGLTSCCLYGNTPYAQQEM
KLKRGVDIVVGTPGRIKDHIMRGNIDLTSLKFRVLDEVDEMLRIGFVEDVEFILGKVADV
KQVQTLLFSATLQDWVKHIASKFLKPDKKTVDIVGNEKMKASTSVRHIIIPCSISARSQL
IPDIIRCYSSGGRTIIFTETKGYASELAGLLPGARALHGDIQQSQREVTLAGFRSGKFLA
LVATNVAARGLDIDNVELIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSNISR
IERESGVKFEHIAAPQPADIAKVIGKEAAEQIAGISDSVIPAFKAAAESLLSTSDLSPAD
LLAKALAKAAGYTEIKSRSLLTSMENCVTLHLESGKPVYSPSFVYNVLKRFLSEETAESI
KGLTLTADGTGAVFDVSTEDVDTFIEGAKKAYDVSLEVVKTLPPLQEREQSRGGGRFGGG
GRGFSGGRGGRFSGGRGGRGGFSDRRRGGGGGRGHKW
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgtcattgttgctgaagccatggcctctgaagagtcactaaaagacctgaag
aagaaggggaagaagactccaaaaccagccgctgaaaccctagactctgaaaagaagaag
tcaaggcatagtaaggttgattcggagtctgatcccgagggaagctcggcggagaagaag
cggagtaagaagaaggagaagaagcgaaaggctgccgagattgatagcggcgatgagcag
gggagcgagagctccgagttggtggagccggtgaacttcaaggcggaaaagaaaaagaag
gctaagttgatggaggcggttggtggtgatgaggaggaggaggatccgtacgcgattacc
aatttccggatttcgaagcctctcagagaggctttgaaagctaagggaattgagtcgttg
tttaagattcaagctatgacctttgaggccgttttggatggtactgatatggtcggtagg
gctcgtactggtcagggtaaaacactggcctttgttttgccaattttggagtccttaact
aatggtccagctaaagctacccggaagaccgggtatggtagacctcccagtgttctggtg
cttttacctaccagggagctcgctcttcaggtttttactgactttgagatgtatggtggg
gcattggggctaacttcttgttgcttgtatggtaatacaccttatgcacaacaagaaatg
aaattgaaaagaggagttgacattgtagttggaacgcctggacggatcaaggatcatata
atgaggggaaatattgacttgacctctttgaagtttcgtgtccttgatgaagttgatgaa
atgctgaggattggttttgttgaggatgttgaatttattctaggcaaggtggcagatgtg
aaacaagttcaaacactccttttcagtgcaacattgcaggattgggtgaagcatattgcc
tctaagttcctcaagcctgataagaagacggtagacattgttggcaatgagaaaatgaag
gctagcactagtgtcagacatattattattccatgctctatctcagccagatctcaactt
atacctgatattattcgatgctatagcagtggaggtcgcactattatttttactgaaaca
aagggttatgcatctgagcttgctggcttgttgcctggggcccgggctttgcatggagac
atacaacagtcccaacgtgaggttacacttgctggtttcagatcaggcaagttcttggca
ttagtagccactaatgtggcagcacgtggattggacattgacaatgtcgagttaattatc
cagtgtgaacccccacgcgatgtagaagcttatattcatcgatctggaagaacaggaagg
gcaggaaatactggtgttgctgtaatgctttatgatcctaagaggtccaacatttctagg
atagaaagggaatctggtgttaagtttgagcatattgctgctccacagccagctgatatt
gctaaagttattggtaaagaagctgcagaacaaattgctggaatttctgatagtgtaata
ccggcattcaaggctgctgctgagagtctgctaagcacctctgatctgtcaccagcagat
ttgcttgcaaaggcactggctaaggctgcaggatatactgagatcaagagccggtcactt
ctcacttccatggagaactgtgttactctacaccttgagagtgggaagcctgtctattca
ccctcctttgtatataatgtcttgaagaggttcttatctgaagagacagctgaatcaatc
aaaggcttgactttaacagctgatgggacgggtgcagtttttgatgtgtctactgaggat
gtagataccttcatagaaggtgctaaaaaagcatatgatgtcagtctggaagttgtgaaa
acattgcctccattgcaagaaagggaacagagtcgaggtggtggtagatttggaggtggt
ggtcgtgggttctccggtgggagaggtggccgcttttccggtgggagaggtggaagaggg
ggattttctgatcgaagaagaggtggtggtggtggaagaggccacaaatggtga
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