Ipomoea nil (Japanese morning glory): 109153240
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Entry
109153240 CDS
T04663
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109153240
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109153240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
TRM82_WD
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
TPR_19
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_SCAP
TPR_17
Beta-prop_VPS8
RMD1-3
TPR_8
WDR90_beta-prop_4th
ANAPC3
Katanin_con80
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
109153240
NCBI-ProteinID:
XP_019156639
LinkDB
All DBs
Position
Un
AA seq
763 aa
AA seq
DB search
MILGEMESLCFRDGNITDFINGRSLDVHHDIDHRLQMHSSLVQRLSLERELEDHQGCVNT
IAWNSRGSLLISGSDDMRMNIWSYSNCKLLHTIETGHTANIFCTKFVPETSDELVVSGAG
DAEVRVFHLSHLSGRGRDVNVVSPSALFQCHTRRVKKLAVEVGNPNVVWSASEDGTLRQH
DFRERASCPPAGSSHQECRNILLDLRCGAKKSLADPPKQFFSLKSCDISSTRPHLLLVGG
SDAFARLYDRRMLPPLSSSQKKFPPPPCVNYFCPMHLSDHNRSSLHLTHVAFSPNGEEVL
LSYSGEHVYLMDVIPARGSSICYSYEDAAKLLNFNPTNNGVELQSSVTGDLLNGSLTRQS
AAKLDSCRKLIQAAEKILKEETSFYYGIEACNEVLDGYGDEIGPKLISECLCIRAALLLK
RRWKNDAHMAIRDCHRARKINPTSFRALLLIAEALSQIGKYEKAMEFAIGAQSLAPYETE
VVDMVDNLRKHIAVAETEKTKKENGESKSEHPQGRPVSLSDIIYRSDANSDASQDGPRSD
RGDSDDEELELAFETLSGDEGHEIRPNVFHGSLNLRIHRRGDTNSTGRVNGTCGSPTSSF
QDEKASYKPEMAVDMKRRYVGHCNIGTDIKQVSFLGQRGQYIASGSDDGRWFIWEKKTGR
LIKMLHGDESVVNCIQSHPYDCVVATSGIDNAIKIWTPSASAPSIVAGGAAGPETSKVLD
AMENNQRRMSRTREAILPVEFLERFRLHEFAEGSMHPFECTQS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgattctcggcgaaatggagtccctgtgcttccgcgatggcaacattacggacttcatc
aatggtcgctctcttgacgtccaccatgacattgatcacagattacaaatgcactcatct
ttggtacaaaggctgtctttagaaagagaactagaggatcatcagggttgtgtgaatact
attgcttggaattcaagagggtcacttctgatatctggatctgatgatatgagaatgaat
atatggagctattcaaactgcaaattacttcacactattgagacaggccacactgcaaat
atattctgcacaaaatttgttcctgaaacttcagatgaactagttgtttctggagcggga
gatgctgaagttcgcgtttttcatttgtctcatttgagcggaagaggacgggatgtgaat
gttgtcagcccatcagcactgtttcaatgccataccaggagggtcaaaaaattagctgta
gaagttggaaatccaaatgtggtatggagtgcaagtgaggatggaactttgaggcaacat
gattttcgagagcgtgcttcttgccccccagctggttcttctcatcaagaatgccgcaat
attcttcttgacttgcgctgtggagctaagaagtcattggcagatcctcctaagcagttt
ttttctctgaagtcatgtgatatcagctcaacgaggccccatttgctacttgttggaggg
agtgatgcttttgctcgtttgtatgatagacgaatgctgccaccattatcttctagtcag
aaaaagtttccaccgcctccttgtgtcaattatttctgcccaatgcatctctctgaccat
aatcgttccagtttgcatcttactcatgttgcattcagtcccaatggtgaagaagtttta
cttagctacagtggggagcacgtttatttgatggatgtgatccctgcacgcggaagttct
atttgctattcctatgaagatgctgctaagcttttgaacttcaatcctacaaacaatgga
gtggaattgcaatcatcagttactggggacttattaaatggatcattaacaaggcaatct
gctgccaagcttgattcgtgcagaaagttaattcaagcggcagaaaaaatattgaaagaa
gaaacaagtttttattatggcattgaagcttgtaatgaagtcttagatggttatggggat
gagattggacctaagctaatttctgagtgtttatgtattcgagcagccttattgctcaag
aggaggtggaaaaatgatgcacatatggctatacgagactgtcatagagctcgaaagatc
aatccaacttcgtttagagcattgctgttgatagctgaagctttgtcccagataggtaag
tacgaaaaagctatggagtttgctattggtgctcaatccttggctccatatgagactgaa
gttgtagatatggtggacaatttaagaaaacatattgctgtagctgaaacagagaaaact
aagaaggaaaatggagaatctaaatctgaacatccgcaaggacggcctgtgtcattaagt
gacattatctaccgttcagatgcaaatagtgatgcatcacaggatggtcccagatctgat
agaggagattctgatgatgaggagctagaattggcttttgagacattatctggggacgaa
ggtcatgaaattaggcctaatgtttttcatggaagtttaaatttaagaatccatcgcaga
ggtgatacaaattcaacaggaagagtgaatggcacttgtggatcaccaacatcatcattc
caagatgagaaagcatcgtataagcctgagatggcagtagatatgaaaaggagatatgtc
ggccactgtaatataggcactgatataaagcaagtgagtttcctaggccaaagaggtcag
tatattgctagtgggagtgatgatggtagatggtttatctgggaaaagaagactggtaga
ttaataaaaatgcttcatggggatgaatctgttgtaaattgtatacagtcccatccatat
gactgtgttgtagctacaagtgggattgataatgccataaagatttggaccccaagtgca
tcagccccttccattgtagccggtggagcagcaggacctgagacttcaaaggttctagat
gctatggaaaacaatcagcgcagaatgagtcgaactcgcgaagcgattttgcctgtggag
tttctggaacggtttaggttgcatgaatttgcagaaggcagtatgcatcctttcgagtgc
acacagagttaa
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