Ipomoea nil (Japanese morning glory): 109153533
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Entry
109153533 CDS
T04663
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109153533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109153533
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109153533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
109153533
NCBI-ProteinID:
XP_019156943
LinkDB
All DBs
Position
Un
AA seq
306 aa
AA seq
DB search
MAVANGSGDYSSKMELDAFRHLFPMQFHDSHHAKSIRPDAREIREARYTTVVLGSVASAD
GSALVKIGSTTMLAAIKMEIMTPTAESPDEGSIAVEFHMPPICSPVVRPGRPADAAPVIS
KQLLETITSSGMIDLKDLCLFSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLRIP
IVSLNDDGRVVLVPKNKDKNASEELKGPANKEEKRKLKLKNVPFSLTCVLHKSYIIADPT
AEEESLMETVVTVVLDSSYQLLSLYKPGGPAVANTSAIQGCVTLAWQRINELKKILHEAI
SDMEVD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgccaatggctctggtgattattcttcaaaaatggagctggatgcatttaga
cacctttttcctatgcaatttcatgatagccatcatgccaaatcaatacgacccgatgcc
cgtgaaatcagagaagctagatacacaacagttgtacttggcagtgttgcatcggcagat
ggatcagcacttgtgaagattggatccactacaatgttggctgcaattaaaatggaaatc
atgacacctacagctgaatcaccagatgagggatccatagctgttgaattccatatgcct
ccaatttgttctcccgtggtccgaccaggcaggccagcagatgctgctcctgtaatttca
aaacaactgttagaaaccatcactagttctggcatgattgatttgaaagacttatgtttg
tttagcgggaaagctgcttggatggcctatctggacatatactgtttggatgctgatggt
gccctgtttgatgctgcattactttcagcagttgctgcattttcacatttaagaatccct
atcgtttctttgaatgatgatggaagagtagttcttgtccccaaaaacaaagacaagaat
gctagcgaggaattgaaaggacctgctaataaagaagagaagcgaaagctcaaattgaag
aatgtgccattttccttgacatgtgtacttcacaagagctatatcatagcagaccctaca
gcagaggaggaatctctaatggaaacagttgttactgtggtgttggactcatcttatcag
ctcttgtctctttacaagccagggggacctgctgttgccaacacatcagctattcagggt
tgtgtgacattggcatggcagagaatcaatgaactcaaaaagatattacatgaagctatt
tctgatatggaggtggactga
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