Ipomoea nil (Japanese morning glory): 109153600
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Entry
109153600 CDS
T04663
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109153600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109153600
03009 Ribosome biogenesis [BR:
ini03009
]
109153600
04131 Membrane trafficking [BR:
ini04131
]
109153600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ini04147
]
109153600
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109153600
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109153600
Membrane trafficking [BR:
ini04131
]
SNARE
SNARE associated proteins
Others
109153600
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109153600
Exosome [BR:
ini04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109153600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
AAA_28
nSTAND3
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NB-ARC
AAA_24
TsaE
NACHT
Vps4_C
DUF815
Zeta_toxin
AAA_lid_PRS2_C
Phage_Mu_Gp48
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
109153600
NCBI-ProteinID:
XP_019156993
LinkDB
All DBs
Position
Un
AA seq
806 aa
AA seq
DB search
MSHQAESSDSKSTKKDFSTAILERKKAPNRLVVDEAVNDDNSVVALNPATMEKLQLFRGD
TVLIKGKKRKDTVVIALADDTCEEPKIRMNKVVRANLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGDLFESYLKPYFLEAYRPLRKGDHFLVRGGMRSVEFKIIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKYTHGFSGADITEICQRACKYAIRENIEKDIEREKRRSEN
PDSMDEDVEDEISEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGSGGASGADPFATSTAGADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaggccgagtcatcggactcaaaaagcactaagaaagacttctctaccgcg
atcttggagcggaagaaggcgcctaatcgcctcgtcgttgacgaggcggtcaacgatgat
aactcggtcgttgccctcaaccccgccaccatggagaagctccagctctttcgcggtgac
acagttctgatcaagggaaagaaaaggaaagatacagtggtcattgcccttgctgatgac
acatgtgaagaacctaagatcaggatgaacaaagttgtcagggcaaatttgagggttcgg
cttggtgatgttgtttctgtccaccagtgtccagatgttaagtatgggaaacgtgtgcac
atacttcctatagacgataccattgaaggagtcaccggggacctctttgaatcctacttg
aagccttactttttggaggcatatcgccctctgaggaaaggagaccatttccttgttagg
ggagggatgagaagtgtggaattcaagatcattgagactgatcctggggagtattgtgtt
gttgctcctgacactgaaatattctgtgagggagagccagtgaggagggaagatgaggat
agacttgatgaagtgggctatgatgatgttggtggtgttagaaaacaaatggctcagatt
cgtgaattggtggagctgccattgaggcatcctcaacttttcaaatccattggtgtgaaa
ccacccaaaggaattttactctatggcccgcctggttctgggaagacgctgatagcaaga
gctgttgctaatgaaactggtgcatttttcttctgtatcaatggaccagagattatgtcc
aagttagctggagagagtgaaagcaaccttaggaaggcttttgaagaggctgaaaagaat
gccccttctatcatatttattgatgaaattgattcaattgctcccaagcgggagaagacg
catggtgaagttgagagaagaattgtctcacaactgttgactctgatggatggattgaaa
tcccgtgctcatgttatagttatgggagccacaaaccgacctaacagtattgatcctgct
ctaagaagatttggtaggttcgacagggaaatagacattggtgttccagatgaagttgga
cgccttgaagttcttcgcattcataccaagaatatgaaactttctgaggaggttgatctt
gagagaattgctaaagacactcatggttatgttggtgctgaccttgcagctctctgtact
gaagctgcacttcaatgcattagagaaaagatggatgtcattgatttggaggatgaaaca
attgatgcagaggttttgaattccatggctgtttcaaatgaacacttccaaactgctttg
ggaacaagcaatccttctgctttacgtgagactgttgttgaagtgcccaacgttagctgg
gaagacattgggggccttgaaaatgtcaaacgagaacttcaagagacggttcaatatcct
gtggagcacccagagaagtttgaaaaatttggcatgtcaccttcaaaaggtgttcttttc
tatggtcccccaggatgtgggaaaactcttctggctaaggcaattgcaaatgagtgtcaa
gcgaatttcattagtgttaaagggcctgaattgctcacaatgtggtttggagagagtgag
gccaatgttcgtgaaatttttgacaaggctagaggatcagcgccatgtgttctcttcttt
gatgagcttgactcgattgccactcagaggggaagcagcgtcggggatgctggtggtgca
gctgatcgggttcttaaccaacttctaactgaaatggatggcatgactgcaaaaaagact
gttttcataattggggctacaaacagacctgacataattgaccctgcactccttcgtcct
ggcagacttgatcaattaatttatatccctctccctgatgaggattcacgccaccagatt
ttcaaggcttgccttagaaaatctcctctttcaaaagatattgatctgcgagctcttgca
aaatacactcatggatttagtggagctgatattacagaaatctgccagcgagcctgcaaa
tatgccattagggagaacattgagaaagatatagagagggagaagaggagaagtgagaat
cctgattccatggatgaggatgttgaggatgaaatatcggagattaagcctgcacatttt
gaggagtccatgaagtatgctcgtcgcagcgttagtgatgctgatatacgcaagtaccag
gcatttgctcagacgttgcagcagtctcgaggctttggaaccgagttccgctttgctgag
tcaggatccggcggtgcttccggagctgacccgtttgcgacatccactgctggagccgat
gaagatgacttgtatagttaa
DBGET
integrated database retrieval system
