KEGG   Ipomoea nil (Japanese morning glory): 109153814
Entry
109153814         CDS       T04663                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03420  Nucleotide excision repair
ini04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109153814
  09124 Replication and repair
   03420 Nucleotide excision repair
    109153814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109153814
   03400 DNA repair and recombination proteins [BR:ini03400]
    109153814
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ini04147]
    109153814
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     109153814
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109153814
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109153814
Exosome [BR:ini04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109153814
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 ORC5_lid
Other DBs
NCBI-GeneID: 109153814
NCBI-ProteinID: XP_019157223
LinkDB
Position
Un
AA seq 820 aa
MSQPTSNPNKRSSPYSSCSATAGDGAPPLHRPPPMKKAKSQAVACSLDTNKNGQHHVHFY
PDVDEDPSSASMEDLDSPGASATRAATANLSRKKATLPQPAKKLVIKLVKAKPTLPTNFE
ENTWATLKSAINAIFLKQPDPCDLEKLYQAVNDLCLHKMGGSLYQRIEKECETHIAVALQ
SLVGQSEDLVVFLSLVEKCWQDFCDQILTIRGIALYLDRTYVKQTPNVRSLWDMGLQLFR
KHLSLASEVEHKTVFGLLQMIESERLGEAVDRTLLNHLLKMFTALGIYPESFEKPFLERT
SEFYAAEGVKFMQQADVPDYLKHVEVRLHEEQERSLLYLDASTRKPLIATAEMQLLERHI
SAILDKGFKTLMDGNRTEDIQRMYMLFSRVNALESLRQALNLYIRRTGQGIVMDEEKDKD
MVSNLLEFKASLDKIWEESFTKNEAFSNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAG
NKGTSEEELEGTLDKALVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLK
TECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMSVHVLTTGYWPTYPPM
DVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGRKELAVSFFQTVVL
MLFNEAEKFSFQDIKEAIGIEDKELRRTLQSLACGKVRVLQKIPKGRDVEDDDTFVFNDQ
FTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLIAEL
FQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq 2463 nt   +upstreamnt  +downstreamnt
atgtctcaacccacctccaaccccaacaagcgctcatctccctactcctcctgctccgcc
accgccggcgacggcgcgccaccactccaccgccctccgccaatgaagaaggccaagtcg
caggccgtcgcgtgctctctcgacactaacaagaacggccagcaccacgtccacttctat
cccgacgtcgatgaggacccctcctccgctagcatggaggatctggacagccccggcgcg
tccgctacacgcgccgccactgctaatttgtctcgcaagaaggccactcttccccagccc
gccaagaagctagtcattaagctcgtcaaagcaaaaccaactctgcccacaaattttgaa
gaaaacacctgggcaactcttaagtctgcaattaacgcaatattcttgaaacagcctgat
ccatgtgatctagaaaaactctaccaggctgttaatgacctttgtctgcacaagatgggt
ggaagtctctatcaacggattgaaaaagagtgtgaaacacacatagctgtggcattgcaa
tctttggttggccaaagtgaagatttggtggttttcttatcacttgttgagaaatgctgg
caggacttttgtgatcagatattgacgatccgtggtatagctttgtatcttgacagaacc
tatgtgaaacaaaccccaaatgtgcgctcattgtgggacatgggcttgcagcttttccgc
aaacatctttctcttgcttcagaagttgaacacaaaactgtctttggccttttgcagatg
attgaaagtgagagattaggtgaagcggttgatagaactctccttaaccatcttttgaag
atgtttaccgccttaggaatttaccctgaaagctttgagaagccatttctggaacgcact
tctgaattttatgctgctgaaggtgtcaagttcatgcaacaggcagatgttccagattac
ctgaagcatgtagaggtaagattgcatgaagagcaggaaagaagtttgctctacctggat
gcaagtacaagaaagccactgatagcaactgcagaaatgcaattacttgaacgccatatc
tctgcaattcttgataagggtttcaaaacactaatggatggaaatcgtactgaggatatc
caaaggatgtacatgcttttctctagggttaacgcccttgaatctttaaggcaagccctt
aacttgtacatccgaagaactggacagggcattgtcatggatgaggaaaaagacaaagac
atggtatccaacctattagaatttaaggcatccctagataaaatatgggaagaaagcttc
actaaaaatgaagcatttagtaataccatcaaggatgcatttgagcacctcataaacctc
cgccagaatcgccctgcggagctgattgctaagtttctggatgaaaaacttcgtgccggg
aataagggtacatctgaagaggagttggagggtacacttgacaaagccttggttttattt
cgttttatacagggtaaagatgtttttgaagcattctacaagaaagatcttgcaaaaagg
ttattattggggaaaagtgcttcaattgatgcagagaagtccatgatttctaagttaaag
acggagtgtggtagccagtttaccaataaacttgaagggatgttcaaggatattgaacta
tcaaaagagataaatgaatcctttaagcaatcatcccaagccaggacaaaactccctatg
ggaatcgagatgagtgtgcatgtactaaccactgggtactggcctacatatccgcccatg
gatgttcggcttccccacgaactcaatgtgtatcaggatattttcaaggagttttaccta
agcaaatacagtgggaggcgcttgatgtggcaaaattcattgggtcattgtgtactgaaa
gcagaatttccaaaaggcaggaaggagctggctgtttccttctttcagaccgttgttctg
atgcttttcaatgaagcggaaaagttcagctttcaagatatcaaagaagcaattggtatt
gaggataaagaactaaggaggactttacaatcccttgcatgtgggaaagtgcgggtcctc
cagaagataccaaaaggaagagatgtggaggatgatgatacctttgtgttcaatgatcag
ttcactgctccactttatcgaattaaggtaaatgccatccagatgaaagaaacagttgag
gagaacacgagcaccacagaaagagtattccaggaccggcaataccaggttgatgctgca
attgttaggataatgaaaaccagaaaagtcctaagccacactctcttgatagctgaactc
tttcagcagctaaaatttccaataaagccggctgacttgaagaagaggatcgaaagcttg
atagacagggagtacctggagcgggacaaaagtaatcctcagatatacaattaccttgcc
tag

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