Ipomoea nil (Japanese morning glory): 109154834
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Entry
109154834 CDS
T04663
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ini03041
]
109154834
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109154834
Spliceosome [BR:
ini03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109154834
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
Ski2_cyano_M
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
109154834
NCBI-ProteinID:
XP_019158124
LinkDB
All DBs
Position
Un
AA seq
1176 aa
AA seq
DB search
MAIQSVLSLSSHPFTFRFQSNKPSALILCKPLLHVQNLGFCFIKPLQHSRTVNKCPRSVL
PVESQVSDEGEDDEEEEEEEEEEEEEEDDDAEDEEAAEEYGVISAEVSDGGEESEYESDA
ANSIDVARDDKLKFEEFKWQRVERICRDVREFGEEIIDANELASVYNFRIDKFQRLAIQA
FLRGSSVVVSAPTSSGKTLIAEAAAVATVAKGRRLFYTTPLKALSNQKFREFRETFGDSN
VGLITGDSVINKDAQVLIMTTEILRNMLYQSVGMVSSDSGLLHVDVIVLDEVHYLSDISR
GTVWEEIVIYCPKEVQLICLSATVANPDELAGWIGQIHGRTELVTSLRRPVPLTWHFSTK
TSLLPLLNEKGTSMSRSLSLNYLQLDESEATLQKGERSRRRNSRKRGSDVNPLSKNEIST
LRRSQVPQIMDTLLQLKARDILPAVWFIFSRKGCDAAVQYLENCKLLDECEVSEVELALK
RFRIQYPDAVRESSVKGLRRGLASHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGIN
MPARTAVISSLSKRGDSGRVLLSSNELFQMAGRAGRRGIDELGHVVLVQTPYEGPEECCK
LIFSGLQPLVSQFTASYGMVLNLLAGAKVTRGSMESDELKISRGGRTLEEARKLIEQSFG
NYVGSNVMVAAKEELSRIEKEIEMLTSEISDEAIDRKIQKLLSQSAYQEISNLQEELKAE
KRLRTELRRRMELERMFSLKPLLKELEDGHLPFVCLQYNDADGVQHLVAAVYLGNVDALS
ASKLKNVVHHSDLFAINMEVESNENGGNEGEDNSKPCYHVALGSDNSWYLFTEKWIRTVY
RTGFPNVALAHGDALPREIMTELVEKGDMQWQKLAESGFGGLWCMEGSLETWSWSLNVPV
LSTLSEDDEVLEFSQAYKDIVECYKDQRNKVSRLKKKIARSEGFKEYKKIVDMAGFTEEK
IRRLKVRSNRLINRIQQIEPTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGEN
ELWLAMVLRNKLLLGLKPAQLAAVCGSLVSEGIKLRPSKNNCYIYEPSAIVLDVINLLEE
QRTSVLELQEKHGVRIPCCLDSQFSGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRSID
ILAQVPKLPDIDPLLQSNAKSASSVMDRPPISELAG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggccatacagtctgttctctccctctcttctcatcctttcacctttcgctttcagtca
aacaagccttctgcacttatactctgtaagccacttctccatgtccaaaacctagggttc
tgcttcataaagccactccagcattctcgaactgtcaacaagtgtcccaggtctgttttg
ccggtggagtctcaagtctccgacgaaggcgaagacgacgaagaagaagaagaagaagag
gaggaggaggaagaagaggaagacgacgatgctgaagacgaagaagctgcggaagagtat
ggcgtcatttcagctgaggtttccgacggaggcgaagaaagtgagtacgaaagtgacgct
gcaaattcgattgatgtggcgagagatgataagttgaagtttgaggaatttaaatggcag
agagtcgagaggatttgtagggacgttcgagaattcggagaagaaattatcgacgctaac
gaacttgcttcagtttacaatttccgtattgataagttccagagattggcgattcaagcg
tttctacgaggctcgtcagtcgtagtgtctgcgccaacaagtagtggcaaaactttaatt
gctgaagctgccgctgttgcgacagtggcaaaaggaaggagattgttctacactactcct
cttaaggctttgtcaaatcagaaatttcgggaattccgggagacatttggtgatagtaat
gttgggcttattacaggagattcagtgataaataaagatgctcaggttttaattatgact
actgagattttgcgcaatatgttgtatcagagtgttggaatggtttcatcagacagtgga
cttctacatgttgatgtgattgttttggatgaagtacattatttgagtgacatatctcgg
ggtactgtctgggaagaaattgttatttattgcccaaaagaagttcaacttatatgcctg
tcggcaactgttgctaatccagatgagttggctggttggataggtcagattcatggtaga
actgagttggtgacatcactcagacgtccagttcccctgacatggcacttctcaactaaa
acatctttactacctcttcttaatgaaaaaggcacaagcatgagcaggagtttatcactc
aattatttacaacttgatgaatcagaagctacattacagaagggtgaacggtctagaagg
agaaattcaagaaaacgtggaagtgatgtaaatccactctcaaagaatgagatatctact
cttcgccgctcacaggtgccccagattatggacacattattgcagctaaaggcaagggat
atacttccagcagtgtggtttatctttagtaggaagggatgtgatgcagctgttcagtat
cttgaaaactgtaagctacttgatgagtgtgaagtgagcgaagttgaactggccttgaag
aggttccgcattcaatatcctgatgcagtgagagaatcctctgtgaagggccttcggcga
gggttggcttcacatcatgctggctgtcttcccttgtggaaatcatttattgaagagcta
tttcagcgaggacttgttaaagttgtctttgcaacagagacactcgctgctggaattaac
atgcctgctaggacagctgttatttcatctctcagcaagaggggagacagtggacgtgtc
ctgttaagctcaaatgaattgttccaaatggctgggcgagctggtcgaaggggtattgat
gaattgggtcatgtagttcttgttcagactccatatgaaggtcctgaagagtgctgcaaa
ctaatattttctggacttcaaccccttgtctcacaatttactgcttcctatggcatggtg
ctaaatcttctagcgggggccaaagttactcgtggatcaatggaatcagatgaactgaaa
atctcacgaggaggacggactttggaagaagcaaggaaattaattgagcagagttttgga
aattatgtagggagcaatgttatggttgctgcaaaagaagagctttctagaattgagaag
gagattgagatgctaacttctgaaataagtgacgaagcaattgatagaaaaatccagaag
ctcttgtcacaatcggcttatcaggagatttccaatcttcaggaggaattaaaagcagaa
aaacgcttgcgtactgaactgcggagaagaatggaactggagagaatgttttctttgaaa
cctttgttgaaggaactggaggatgggcatctgccatttgtgtgtttgcagtacaatgat
gctgatggggttcaacatttagttgctgctgtttatttgggaaatgttgatgctttaagt
gcttcaaaacttaagaatgtggttcaccactctgatttgtttgctataaatatggaagta
gaaagtaatgaaaatggtggtaatgaaggtgaagataattccaaaccatgctaccatgtg
gctcttggttcggacaactcttggtaccttttcacagaaaagtggattagaacagtatac
agaacaggcttcccaaatgttgccttagctcatggtgatgccttgcctcgtgaaattatg
acagaacttgttgagaagggggatatgcaatggcagaagctggcagagtcaggatttgga
ggtttatggtgcatggagggatcgttagagacatggtcttggagtttaaatgtgccagtc
ttgagtactctctctgaggatgatgaggtcctcgaattttctcaagcttacaaggacata
gtagaatgctataaagatcaaagaaataaagtttctcgtttgaagaaaaagatagcacga
tcagaaggatttaaagagtataagaagattgtagatatggctggattcacagaggagaag
attcgaaggttgaaagttaggtcaaatcgattgattaaccgcatacaacagattgagcca
actggctggaaggagtttttgcaggtcagcaatgtcattcatgaaagtagggcattggat
atcaatacacatgttatatttccacttggtgaaactgcggcagcgattcgaggagaaaat
gaactctggcttgccatggttcttcgaaataaattattgctgggcttaaagcctgcacaa
cttgctgctgtttgtggaagtctagtttctgaagggattaaacttcggccttcaaaaaat
aactgttacatatatgaaccctctgccattgtcttggatgtcatcaacttattagaagaa
caaagaacctcagttctcgaacttcaagagaagcatggagtaaggataccttgctgcttg
gatagccaattttctggcatggttgaagcttgggcttctggtttaacttggaaggagatt
atgatggactgtgctatggatgaaggagatttagcccgccttttaagaagatcgattgat
atattggctcaggttcctaaattgcctgatattgacccactgctgcaaagcaatgccaaa
agtgcatccagtgtgatggatcgtccaccaataagtgaactggctggatga
DBGET
integrated database retrieval system
