Ipomoea nil (Japanese morning glory): 109154864
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Entry
109154864 CDS
T04663
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ini03009
]
109154864
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109154864
Ribosome biogenesis [BR:
ini03009
]
Eukaryotic type
Pre-60S particles
Helicases
109154864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
109154864
NCBI-ProteinID:
XP_019158145
LinkDB
All DBs
Position
Un
AA seq
585 aa
AA seq
DB search
MAATNKALTATRFSDLKPPLSQPVLEALTNGGFDFCTPVQAATIPLLCSHKDVAVDAATG
SGKTLAFVVPLVEIIRRSSPPKPHQVMGVVISPTRELSSQIFHVAQPFISTLPNIKPVLL
LGGAEVKTDMKKMEEEGANLLIGTPGRLFDIMERMDMLDFRNFEVLILDEADRLLDMGFQ
RQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSTSTGQLA
SSRIPAGLQDEYLVCEADKKSSQLADLLIRNKSNKVIIYFMTCACVDYWGVVLPRISSLK
KLSLIPLHGKMKQAAREKALSTFTSLSSGILLCTDVAARGLDIPGVDCIIQYDPPQDPDV
FVHRVGRTARLGRQGHAIIFLSPKEEAYVDFLRIRRIPLEARECFNEAPDIVPEIRLATK
KDRDVMEKGIRAFVSYIRAYKEHHCSYIFRWKELEIGKLGMGYGLLQLPSVPEVKHHSLS
TESFIPVKDINLEEIKYKDKSREKQRKKNLEAKKAVKQQEVKKPKRDSSLSKAEMKKQTA
KKRRATQTVEDDDEMAKEYRLLKKLKKGAIDETEFAKLTGTEDLL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgaacaaagccttaacggccactcggttctccgacctcaaaccaccgctc
tctcagccagttctcgaagctttgactaatggaggcttcgatttctgcacgccagttcaa
gcagccaccattccattgctttgcagccacaaggatgtcgccgtcgacgccgccaccggc
tccgggaaaaccttagcttttgtcgtccctctcgtcgagattatccgccgctcttctcct
cctaaacctcaccaggtaatgggcgtagttatatcaccaaccagggagttgtcatcacaa
atatttcatgtcgcccaaccttttatttcaacactgcctaatattaagccagtgcttctt
cttgggggagctgaagtaaaaacggacatgaagaaaatggaggaggaaggggcaaatttg
ttgattggcacacctggcaggcttttcgacataatggaacgcatggacatgctagatttt
cggaacttcgaggttttaattttagatgaagcagatagactattagatatgggattccag
aggcaaataaactccattatatctcggttgccaaaacttcgccggacaggtttattttca
gcaactcaaactgaggcagttgaagagttatcaaaagccggattaaggaacccggtgagg
gttgaagttagagcagaagcaaaatcactaaatgattccacatccactggccaacttgcc
tcttcaagaatacccgcaggccttcaggatgagtatcttgtatgtgaagcagacaagaaa
tcatcacagcttgctgatctcctaattaggaacaaatctaataaagttataatttacttt
atgacttgtgcatgtgttgattactggggagttgttcttccacgtatttcttctctgaaa
aagctatctttaatacctcttcatggaaagatgaagcaggctgctagggagaaagcgtta
tcaacatttacatctctttccagtggcattctcttatgcactgatgtcgcggcacgtgga
cttgatataccgggtgttgattgtataatacagtatgacccccctcaggatccagatgta
tttgttcacagagtaggccgaacagctaggctgggaaggcaagggcatgccatcatattt
ctgtcaccaaaggaggaagcatatgtagacttcttgcggataagaaggattccgcttgag
gcaagagagtgcttcaatgaggctcctgatattgttcctgagattcggctagcaacaaaa
aaagaccgtgatgttatggaaaagggaatcagagcgtttgtgtcttatatacgtgcttat
aaagagcatcattgctcatatattttcaggtggaaagagcttgagattggaaaattgggc
atgggatatggcttattgcagcttccttctgtgccggaggtgaagcatcactctctttcc
actgagagttttattcccgtaaaagatataaacctggaggagataaagtacaaggacaaa
tctcgtgagaaacaaagaaaaaagaacttggaggcaaaaaaagccgtaaagcagcaagaa
gtgaagaagccaaagagagactcaagtttgtcaaaagctgagatgaagaagcaaacagct
aagaagaggcgtgctactcagacagtagaagatgatgatgagatggctaaagaataccgc
ctactgaaaaagctgaagaaaggagctattgatgaaactgaattcgcaaagttgactgga
actgaagacttgctttga
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