Ipomoea nil (Japanese morning glory): 109155385
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Entry
109155385 CDS
T04663
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ini03032
]
109155385
03400 DNA repair and recombination proteins [BR:
ini03400
]
109155385
Enzymes [BR:
ini01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109155385
DNA replication proteins [BR:
ini03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
109155385
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
109155385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
EF-hand_13
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
109155385
NCBI-ProteinID:
XP_019158624
LinkDB
All DBs
Position
Un
AA seq
898 aa
AA seq
DB search
MASDQVIAELVGMGFEFSDITDAVKAVGPSVSHAIEYILDGSHGNKGTSTSSTCVAPKTN
SRQKRAPNALPAFDRTRQSNIKECLKSACKPIKRKYNDEPVSHCESEALQRTLEGPTELL
PVMDTDMCNAHETSVPSNCKDEEVFGQDWEKKVKTLLVKHFGFSSLKSFQKQSLEAWLNH
RDCLVLAATGSGKSLCFQIPALLTGEVVVVISPLISLMHDQCLKLAKHGISACFLGSGQI
DRSVEKKAMNGLYSIIYVCPETILRLIKPLQNLAESRGIALFAIDEVHCVSKWGHDFRPD
YRQLSILRENFRVDTLKSLKFDVPLMALTATATNCVREDIIKSIKMSNETQIVCTSFFRP
NLRFSVKHSRTSSLASYQKDFQEIISTYSTMKKFRKNNLISPDLEDVTAISSSTSDCSIP
ELEAMLENDVDNIINDDAFSENDDEIGLPMRHSLPASKERELSVEFLEDESDLFQDVDDL
DVSCGEFHGQPIKDFCASVPLRTVDLPSKTEERLKLQHEPLEYGPTIIYVPTRKETLSIA
KFLLKFGVKAAAYNAKLPKSHLRQVHKEFHEDYLQVVVATIAFGMGIDKSNVRRIIHYGW
PQSLEAYYQEAGRAGRDGKLADCVLYANLSRIPTLLPSKRSEEQTRQAYKMLSDCFRYGM
QNSQCRAKMLVEYFGEKFGLQKCLLCDVCINGPPEMQNLKAEAAILMQIVYAHYGQSSYP
DISYDGDITRHSEKRRKLYEKPNIRELVSRIREQHQEFTTSEVLWWRGLARILEAKGFIR
ESDGKNHVQIRCPELTELGRRFLRCEGEGEGEEAFNVYPEADMLLSTATARATAQGKPYS
SFAEWGKGWADPEIRRQRLQRKRLWKSPKKRRKSHKPLPSTNTNTVRGRLTAKLSAKK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaccaggtaattgctgaattggttggaatgggatttgaattctctgatatt
acagatgctgtaaaagcagttggtccatcagtaagtcatgcaattgagtatatattggat
ggttcacatggaaataaggggacatcaactagtagtacatgtgttgcccccaagaccaat
tctaggcagaaaagagcccctaatgccttgcctgcttttgatagaacgaggcagtctaat
ataaaagaatgcctgaaatcagcttgcaagcctataaaaaggaagtacaatgatgaacct
gtatcacactgtgaatcagaggcattgcagaggaccctagaaggtcctactgagcttctt
cctgtgatggatactgatatgtgcaatgcacatgaaacatctgtaccatcgaattgcaaa
gatgaagaggtctttggccaagattgggaaaagaaggtcaaaactttgttggtcaagcac
tttgggttttcttccttgaaaagttttcagaagcaatctctggaagcttggttgaatcac
agagactgccttgtgcttgcagcaactggatctgggaaatctctgtgttttcagattcca
gcattgctcactggtgaggttgtcgttgttatttcaccattgataagcttgatgcatgac
caatgcttgaagctagcaaaacatggaatatcagcttgctttcttggatctggtcaaatt
gatcgaagtgttgaaaagaaagcaatgaatggtttgtatagcattatatatgtatgccca
gagacaattttaagactaataaagccactccaaaaccttgctgaaagccgtggaatagct
ttatttgcgattgatgaagttcattgtgtttctaagtggggccatgactttcgaccagat
tataggcaattgtctattctgagggaaaactttcgagttgacactttgaagtccttgaag
tttgatgtaccactaatggcattgactgctactgctactaattgtgttcgtgaagacatt
attaagtcaataaaaatgtcaaatgaaacccagattgtttgcacttcatttttccggcca
aaccttcgattctctgtaaagcattctagaacatcgtccttggcttcctatcagaaggac
tttcaagaaataataagtacttactcaacaatgaaaaagtttagaaaaaataatttaatt
tctccagatctggaggatgtcactgcgatctctagtagcacttcagattgcagcattcct
gaacttgaagcaatgcttgagaatgatgtagacaacattattaatgacgacgctttctct
gaaaatgatgatgaaataggtcttcccatgagacattccttgcctgcttcaaaggaaaga
gaattatcagttgaatttctagaagatgaaagtgatcttttccaagatgtcgatgattta
gatgtttcctgtggtgagtttcatggacaaccaatcaaggacttctgtgcttctgtacca
ctcaggactgttgatctacccagtaaaacagaagagagactaaagctacaacatgaaccc
ttggaatatggaccaacaataatatatgttcccactaggaaagaaacattaagcatagca
aagtttctattgaagtttggggtaaaggctgctgcttataatgcaaagttgccgaaatca
catctaagacaggtgcacaaggaatttcatgaagactacttgcaggttgttgtcgcaaca
atagcctttgggatgggaatagacaagtcaaatgttcgtaggatcattcattatggttgg
ccgcagagtttggaggcatattatcaagaggctggacgagctggacgagatggaaagttg
gcagattgtgttttatatgccaacctatcaagaataccaacacttttaccgagtaaaaga
agtgaagagcagacaagacaagcatataagatgctatcagattgcttcagatatggaatg
caaaattctcaatgtcgggccaaaatgcttgtggagtactttggcgagaagtttggcttg
cagaagtgtctcttgtgtgatgtctgcattaatggacctcctgaaatgcagaatctgaag
gccgaggctgcaattctcatgcaaattgtttatgctcattatggtcaaagcagttatcca
gacatctcgtatgatggtgatatcacacgccacagtgaaaaaagaagaaaactttatgaa
aagccaaatatcagggagcttgtcagtagaataagggaacagcatcaagaatttaccaca
agtgaagtcttatggtggcgaggtcttgccagaattttagaagcaaaaggatttataagg
gagagcgatggcaagaatcatgtgcagataagatgcccagaactaacggaactgggaaga
cgatttctgaggtgtgagggagagggagagggagaagaagcatttaatgtatatcctgaa
gcagatatgctactatcgacagccacagcccgagccacagcacagggcaagccatattct
agctttgcagaatggggaaaaggttgggctgatccggagatcaggcgccagcgtttgcag
agaaagcggttatggaaatcacccaagaaaagaagaaaatcacataaaccattgcccagt
accaataccaataccgttcgaggaaggttaaccgcaaagctctctgcaaagaaatga
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