Ipomoea nil (Japanese morning glory): 109155563
Help
Entry
109155563 CDS
T04663
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini00040
Pentose and glucuronate interconversions
ini01100
Metabolic pathways
Module
ini_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109155563
Enzymes [BR:
ini01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109155563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
ADNP_N
Motif
Other DBs
NCBI-GeneID:
109155563
NCBI-ProteinID:
XP_019158706
LinkDB
All DBs
Position
Un
AA seq
427 aa
AA seq
DB search
MGSKVIQAALIFFYVAYLVATVQGVEVSVKKSGAKGDGKCDDAPAFKKAWGEVCKAAAPS
TLKVPAGKYMVGQIGFLGPCKSAITFDAGDATFIAPTDPTAFKTKDGWILFSMVKDLTVT
GGTFDGRGSAAWKINNCNKNFNGNCKNLPINLNFGTLTNGVVKGVTSVDSKFFHMNVIQA
KNLTLSKITIKAPGDSANTDGIHIGRSHGVTVDGAEIKTGDDCISFGDGCQNVTVENVKC
GPGHGISIGSLGRYPNEQPVMGVTVKHCKLSNTLNGVRIKTWPASPNGVASGMHFEDVKM
DNVSNPILIDQQYCPWNQCKTGVPSKIKISDVSFKEITGTSATKVAVKLLCSSGVPCNKV
VLSGVKLEYKGTNGSTISECDNVKPTLSGKNSPAICDATKGGAPEGAPAPGAPAPAPKKD
ASAPKKA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaggtgattcaagctgcattgatttttttctatgtggcatatcttgtagca
acagtgcagggtgttgaagttagcgttaaaaaatctggtgcaaaaggcgacgggaagtgc
gatgatgctccggcttttaagaaagcttggggtgaggtatgcaaagcggcggcgccgagc
acgctgaaagttcctgccggcaagtatatggtgggtcagattgggtttctaggtccttgt
aagagtgccataacatttgatgcgggagacgccacttttatcgcgccaaccgaccccact
gcgttcaaaacaaaagacggatggattttgttcagcatggttaaagacttgacggtcacc
ggcggcactttcgacggtcggggttccgccgcctggaagataaacaactgtaacaagaat
ttcaacggaaactgtaaaaacctccccattaacctcaactttggtacgttgacgaacggg
gtggtgaaaggagtaacgtcggtggacagcaagtttttccacatgaatgtgatacaggcc
aagaacctaacgttgagcaaaatcactatcaaggcgcctggggatagcgccaacaccgac
ggaatccacatcggacgttcccatggggttaccgtcgatggtgctgaaattaagaccggc
gatgactgtatctccttcggggacggttgccagaatgtgaccgtcgaaaatgtgaagtgc
ggccctggccacggaatcagtattggaagcttaggaagataccctaacgaacaaccggtg
atgggagtgacggtgaagcactgcaaactctccaatactctcaacggcgttaggatcaag
acgtggccggcgtctccgaacggcgtcgcctccggcatgcacttcgaagatgtgaagatg
gacaacgtcagcaacccaatcttgatcgatcagcaatattgtccctggaatcaatgcaag
accggcgttccgtcgaaaataaagatcagcgacgttagcttcaaggagataacggggacg
tcggcgacaaaggtggcggtgaaattactgtgcagctccggagtaccgtgcaacaaagta
gtgttgagcggggtgaagttggaatacaaaggaaccaacggcagcaccatatcggaatgt
gacaacgtgaagccaacactttccggcaaaaattcccctgcaatttgtgatgccaccaaa
ggaggcgcccctgaaggtgcccctgccccaggtgcccctgcccctgcccctaaaaaagat
gcctctgcccctaaaaaagcttag
DBGET
integrated database retrieval system
