KEGG   Ipomoea nil (Japanese morning glory): 109156798
Entry
109156798         CDS       T04663                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03420  Nucleotide excision repair
ini04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109156798
  09124 Replication and repair
   03420 Nucleotide excision repair
    109156798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:ini03051]
    109156798
   03400 DNA repair and recombination proteins [BR:ini03400]
    109156798
Proteasome [BR:ini03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    109156798
DNA repair and recombination proteins [BR:ini03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      109156798
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 Dsc3_N Rad60-SLD_2 UBA_RAD5A CUE TECR_N UBA_3 Crinkler Ubiquitin_4 Ubiquitin_5 Ubiquitin_2
Other DBs
NCBI-GeneID: 109156798
NCBI-ProteinID: XP_019160191
LinkDB
Position
Un
AA seq 389 aa
MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETVQGSNVYPASQLMLIHQGKVLKDGTTLE
ENKVAENNFVVVMMAKTKSSSGEGSASSTATTKTIAPASSTSASTAPAPVPASAPAPVPA
SAPVPVAAPAPTPAPTAGSGDVYGQAASNLVAGNNLEGAIQQILDMGGGTWDRETVVRAL
RAAYNNPERAVEYLYSGIPESAEVPPAEGNPPPVLQPPNQAAQPQQAAQPAPVPSSAPNA
NPLDLFPQGLPNIPSSNAGGANTLEFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPH
LMRLIQEHQADFLRLINEPVEGGEGNILGQLAASMPQAVQVTPEEREAIERLEAMGFDRA
LVLEVFFACNKNEELAANYLLDHMHEFED
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgaaaattttcgtgaagactctaaagggtactcactttgaaatcgaagtgaaacctgaa
gatacggttgctgatgtcaagaagagcatagaaactgttcagggatcgaatgtttatcct
gcttcacagctgatgcttatccaccagggaaaagttcttaaagatggcaccacattggaa
gagaataaagttgctgaaaataactttgttgtggtgatgatggcaaagactaagagctca
tctggagaaggctcagcatcgagtacagctaccactaagacaattgcacctgctagctca
acttctgcatcaacagctccagctccagttcctgcctcagctccagctccagttcccgcc
tcagctccagttccggttgctgccccagctcccactccggcaccaactgctgggtcagga
gatgtgtatggtcaggcagcttccaacttggttgctgggaacaaccttgagggagcaatc
cagcagattcttgacatgggtgggggaacctgggatagggaaactgttgttcgagccctt
cgtgctgcttataacaatccagagagagctgttgaatacctgtattctggcatccctgag
tcggctgaagttcctccggccgaaggaaacccccctcctgttctgcagcctcctaaccag
gcagctcagcctcagcaagctgcacaaccggcacctgttccgtctagtgcaccgaatgca
aatcctttagatttattcccccagggtcttcccaacattccttcctccaacgctggtgga
gccaacaccttagaatttttacgcaatagtcagcaattccaggccttacgagcaatggtt
caggccaatccacaaatcttgcagcccatgcttcaggagctggggaagcaaaatcctcat
ttgatgaggctcatacaggagcaccaagctgattttcttcgtcttatcaatgagccagtt
gaaggaggagaaggcaacatattggggcagcttgctgcgtcaatgcctcaagctgtacaa
gtaactcccgaggagcgtgaagcaatagaacgtcttgaagcaatgggatttgatcgagca
ctggtgttagaggtattctttgcatgcaacaaaaacgaggagctagcagctaactacctc
ttagatcacatgcacgagtttgaggattga

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