KEGG   Ipomoea nil (Japanese morning glory): 109157074
Entry
109157074         CDS       T04663                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA1B-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109157074
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109157074
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-RING_16 zf-RING_UBOX zf-ANAPC11 Prok-RING_1 zf-RING_4 zf-C3HC4_3 zf-RING_Vps41 Rtf2 RINGv Prok-RING_4 zf-RING-like zf_RING_Vps8_fungal RH_dom zf-RING_6 Rad50_zn_hook zf-C3HC4_4 zf-Nse zf-C3H2C3 zf-C3HC4_5 PHD_NSD
Other DBs
NCBI-GeneID: 109157074
NCBI-ProteinID: XP_019160498
LinkDB
Position
Un
AA seq 169 aa
MGFPVGYTDLFLPELLVQVLMVMDFVRNLIAMFFGILGLDNFLEPEMSSSSSYPTPEESK
SELQSLSATLIRELLPVVKFSEVADRAESCTVCLLEFDGNDEIRRLRNCRHIFHRSCLDR
WMDHDQKTCPLCRTPFIPGDMQERFNERLWLASGVSDFYGENSQIVAGL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgggttttccggtcgggtatacggatctttttctgccggagctgctggtgcaggtgctc
atggttatggatttcgtgagaaatttgattgccatgtttttcggcattctgggtctggac
aatttcttggaaccggaaatgtcgtcgtcgtcgtcgtacccgacaccggaggaatccaag
tcggagctccaatccttgtccgccacccttatccgggagctcttgccggtggtgaagttc
tcggaggtggcggaccgggcagagagctgcacggtgtgcttgttggagttcgacggcaac
gatgagatccgacggctgcggaattgccggcacatattccaccggagctgcctggaccgc
tggatggaccacgatcagaagacgtgcccgctgtgccggacgccgttcataccgggggat
atgcaggagcggttcaacgagagactgtggttggcttccggcgtttcggatttttacggc
gagaactcgcagattgtcgccggtctttag

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