Ipomoea nil (Japanese morning glory): 109157784 Help Entry 109157784         CDS       T04663                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     109157784  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ini03019]     109157784 Enzymes [BR:ini01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      109157784 Messenger RNA biogenesis [BR:ini03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      109157784 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 ABC_tran DUF1611 Motif Other DBs NCBI-GeneID:  109157784 NCBI-ProteinID:  XP_019161172 LinkDB All DBs Position Un AA seq 431 aa AA seqDB search MATHGGSGSSNVRQEKVDKECELRIEVSPDTPLRLRVLNGTAEIFGTELPPQIWLTFPPR LKFAVFTWYGATIEMDGPTETEYTADETPMISYVNVHAVLDARRHRAKASASDSDTYQGP RVIVVGPTDCGKSTLSRMLLSWAAKLGWKPTFVDLDIGQGSITLPGCIAATPIELPIDPV DGIPLEMPLVYFFGHVTPSANVDLYKVLVKELAQTLEKQFSGNAESRAAGMVINTMGWIE GVGYELLLHAIDTFNATVVLVLGQEKLWSMLNYALKSKPNVDVVKLQKSGGVVSRNAKVR QKSRGYRIREYFYGPSNDLSPHSNIANFSDLSIFRIGGGPQAPRSALPIGAEPAADPARL VPVNINRDLLHLVLAVSYAKEPDQIISSNVAGFIYITDIDIQRKKITYLAPCVGELPSKN LIVGTLAWIEN NT seq 1296 nt NT seq  +upstreamnt  +downstreamnt atggcgactcatggcggaagcggcagctcgaacgtccggcaagagaaggttgacaaggag tgtgagctcagaatcgaagtcagccctgacacccctctccggcttcgggtcctaaacggc accgcggaaatcttcggcaccgaactccctcctcaaatttggctcaccttcccccctcgc ctcaaattcgccgtctttacttggtatggggccacaattgagatggatggtccaactgaa actgagtatacggctgatgagacacccatgatcagttatgtaaatgtgcacgctgtactt gatgctcgacggcatcgtgccaaagcttcagcaagtgactctgatacttaccagggtccc agggttattgttgtgggacctacggattgtggaaagagtaccttatcaaggatgcttctt agttgggccgctaaactagggtggaaaccaactttcgtggatttggatataggccaaggt tctataaccttacctggttgtattgctgccacgcctattgaattgcccattgatccggta gatggaattcctcttgaaatgccactagtctacttttttggccatgttactcctagcgct aatgttgatctttacaaggtacttgtaaaggaacttgcccagactttagaaaaacaattt tctggaaacgctgaatctcgagctgcggggatggttatcaacaccatgggatggatagaa ggtgttggttatgagttgctacttcatgcaattgatacattcaacgccactgttgttctt gtcttgggtcaggagaaactttggagcatgctcaattatgcattgaaaagtaagcctaat gtggatgtggtgaaacttcaaaaatctggcggtgttgtgtccaggaatgccaaagtacgg cagaagtctaggggctacagaatacgggaatatttttacggtccatcaaatgatctttcc ccccactccaacatagcaaatttcagtgatctgtcaattttccgaattggtggtgggcca caggctccacgttcagctctaccaatcggtgcagagccagctgcagatccagcaagatta gtccccgttaatatcaacagagacttgctacatttagttcttgccgtgtcttatgccaag gagccagatcagatcatttctagtaatgttgctgggttcatctatatcaccgacatcgac atacaaaggaagaaaataacgtatcttgcaccgtgtgttggggaacttccgagcaagaat cttatcgtgggaaccttggcgtggatcgagaactga

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