KEGG   Ipomoea nil (Japanese morning glory): 109157968
Entry
109157968         CDS       T04663                                 
Name
(RefSeq) WD repeat-containing protein 82-B
  KO
K14962  COMPASS component SWD2
Organism
ini  Ipomoea nil (Japanese morning glory)
Pathway
ini03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ini00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109157968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ini03019]
    109157968
   03036 Chromosome and associated proteins [BR:ini03036]
    109157968
Messenger RNA biogenesis [BR:ini03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109157968
Chromosome and associated proteins [BR:ini03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     109157968
    COMPASS/SET1 complex (yeast)
     109157968
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 WDR55 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_Nup120_160 NBCH_WD40 PQQ_3 Beta-prop_VPS8 WD_LRWD1 Methyltransf_13
Other DBs
NCBI-GeneID: 109157968
NCBI-ProteinID: XP_019161320
LinkDB
Position
Un
AA seq 339 aa
MKALSELNDDIVRSMTVGAVFSDFGGKISSLDFHRTADLLITASEDDSVRLIDIANAKLL
KTTYHKQHGADQVCFTHHPSSVICSSRHNIATHEESLRYLSMYDNRCLRYFKGHKERVVS
LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIMHLRGRPTVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTSNNIYILDAYCGEKRGGFS
VDPSPNTTIEATFTPDGQYVLSGSGDGNLHAWNIKNPNKVASWDSYVGVASCMKWAPRRV
MFAAASSILTLWIPDHSKRPTDSGTTHPETAAHPEEIIQ
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaaggcactctccgagcttaacgacgacattgttcgtagcatgacagtaggagccgtc
ttctctgattttggtggaaagataagttcacttgattttcatcggactgctgatctattg
ataactgcaagcgaggatgattctgttagacttattgacattgcaaatgccaaactgttg
aagaccacatatcataagcagcatggagctgatcaagtatgctttacccatcatcctagt
tctgttatatgctcttcaagacacaatattgccacccatgaagaatcattgcgataccta
tccatgtatgataatcggtgcctccgttactttaagggacataaagagagggttgtgtca
ctgtgcatgtctcccgttaatgatagctttatgtctggttctcttgaccactctgtcaga
atatgggatctccgtgtaaatgcttgccaggggattatgcatcttcgaggcaggccgaca
gttgcttatgaccagcaaggtcttgtatttgcagtagcaatggaaggtggcgccatcaaa
ttgtttgattctagatcatatgataagggacccttcgatacattccttgttggcggggat
actgcagaggtttgtgatataaaattcagcaatgatggcaaatcaatgcttttgacgact
acaagcaataacatttatatccttgatgcttattgtggagagaagcgaggtggatttagt
gtagatccatctccaaacacaacaatagaggcaacctttactccagatggacaatacgtt
ttgtcaggctctggggatggcaacttgcatgcttggaacatcaaaaacccaaataaggtg
gcttcctgggatagctatgtaggcgttgcatcttgtatgaaatgggctccaaggagggta
atgtttgcagctgcatcttccattcttaccctttggatacctgatcactcaaagcgaccg
actgattctggcacaactcatcctgaaaccgcagcacatcctgaagaaatcattcaatga

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