KEGG   Ipomoea nil (Japanese morning glory): 109158101
Entry
109158101         CDS       T04663                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
ini  Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:ini00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ini04121]
    109158101
Ubiquitin system [BR:ini04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109158101
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EIPR1 MIOS_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR11_1st Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD_LRWD1 NBCH_WD40
Other DBs
NCBI-GeneID: 109158101
NCBI-ProteinID: XP_019161466
LinkDB
Position
Un
AA seq 499 aa
MEGSRNQSFFQDIKSRELHGFRVKKRPFISSESAEFSEMGAVSVEHSGQTSPPMALSFCK
TSSNCHIVAVADEGGYVSLYNTRSKFLSSSTYQENAEKAKISEWVAHDNAIFDICWIQED
SNIVTASGDQSIKVWDVKEQKCLRALMGHTGSVKSICVHPTNHNVIVSGSRDGSFALWDL
RCNDSSGQRLCLQSIAMVHEAHISPCQRRGRRRKASSMSITSVLHLKDEVSIATAGAVDS
VIKFWDTRSLKSPISQACPHPEGSAEKERKLHGISSLSQDLNGVFISASCMDSRIYLYNV
LQLEQGPVKTFSGCRIDSFFVKSSISPDAAHILSGSSDGNAYIWQIRKPLADPIILNSHE
GEVTAVDWCPSETGKIATASDDFTARIWNIQSSCYSNTRSPSSIRRGIMAPSGKQCRKLN
LFPDEKPDCSRNDLDVSYSPVSEISTPESQKRKYSLLGYEMKDKLEKTPEATARSPSSVL
NPPSSLKRRTIRDYFLSAS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggagggctcaaggaatcagtcgttttttcaagatatcaaatcgagggaactccacggc
ttcagagtgaaaaagcgaccttttataagtagcgagtccgcagaattcagtgaaatggga
gctgtttctgttgagcacagcggtcaaacgtcgcctcccatggctctctctttctgcaag
acaagttcaaattgccatatagttgccgtcgccgatgaggggggttacgttagcttgtat
aatacacgctccaagtttctgtcttcttccacttatcaggaaaatgcagaaaaggcgaag
atttctgaatgggttgcacatgataatgccatatttgacatatgttggattcaggaagac
agcaacatagtaacagcttcaggtgatcaaagtataaaggtatgggatgtaaaggaacag
aaatgtttaagagcattgatgggccatactggaagtgtgaaatccatttgtgttcatcct
acaaatcacaatgttattgtctccggttcaagagatgggtcctttgctctatgggatttg
aggtgcaatgacagcagtggccaaagactttgtctacaatcaattgctatggtgcatgag
gctcacatttctccttgtcaaaggcggggtagacgtagaaaggcttcttctatgagcatc
acatctgttctgcatctaaaggatgaggtctccatagctactgctggagcagttgacagt
gttataaagttttgggacacaaggagtctgaaatctcctatcagtcaggcatgccctcat
cctgaagggtcagctgagaaggaaagaaagctgcatggcatatctagtttatctcaagat
ttaaatggagtctttatctctgcatcttgcatggatagcagaatatacctatacaatgta
cttcagctagaacaagggccagtgaaaactttctctggatgccgaattgactcttttttt
gtgaagtcatcaataagccctgatgcagctcacatattaagcggctctagtgatgggaat
gcttacatatggcagataaggaaacctctagcagatcccattatactgaatagtcatgaa
ggagaagttacagcagtagattggtgcccatcggagacggggaaaatagcaacagcatca
gatgatttcacggctcgcatttggaacattcaaagcagttgttactccaacacaagatct
ccttcttccatccggaggggaataatggcgccttcaggcaaacaatgccggaagcttaat
ttatttcctgatgaaaaaccggattgctccaggaatgatttggacgttagctattcaccc
gtctcagaaataagtaccccggagtcccaaaaaagaaaatattcattgttgggatatgag
atgaaagacaagttggagaaaactcctgaagctacagcaaggagcccttcttctgttctg
aatcccccttcttcgttaaagagaagaacaatcagagattactttctgtcagcctcataa

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