Ipomoea nil (Japanese morning glory): 109158101
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Entry
109158101 CDS
T04663
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ini04121
]
109158101
Ubiquitin system [BR:
ini04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109158101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
WD_LRWD1
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
109158101
NCBI-ProteinID:
XP_019161466
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All DBs
Position
Un
AA seq
499 aa
AA seq
DB search
MEGSRNQSFFQDIKSRELHGFRVKKRPFISSESAEFSEMGAVSVEHSGQTSPPMALSFCK
TSSNCHIVAVADEGGYVSLYNTRSKFLSSSTYQENAEKAKISEWVAHDNAIFDICWIQED
SNIVTASGDQSIKVWDVKEQKCLRALMGHTGSVKSICVHPTNHNVIVSGSRDGSFALWDL
RCNDSSGQRLCLQSIAMVHEAHISPCQRRGRRRKASSMSITSVLHLKDEVSIATAGAVDS
VIKFWDTRSLKSPISQACPHPEGSAEKERKLHGISSLSQDLNGVFISASCMDSRIYLYNV
LQLEQGPVKTFSGCRIDSFFVKSSISPDAAHILSGSSDGNAYIWQIRKPLADPIILNSHE
GEVTAVDWCPSETGKIATASDDFTARIWNIQSSCYSNTRSPSSIRRGIMAPSGKQCRKLN
LFPDEKPDCSRNDLDVSYSPVSEISTPESQKRKYSLLGYEMKDKLEKTPEATARSPSSVL
NPPSSLKRRTIRDYFLSAS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcaaggaatcagtcgttttttcaagatatcaaatcgagggaactccacggc
ttcagagtgaaaaagcgaccttttataagtagcgagtccgcagaattcagtgaaatggga
gctgtttctgttgagcacagcggtcaaacgtcgcctcccatggctctctctttctgcaag
acaagttcaaattgccatatagttgccgtcgccgatgaggggggttacgttagcttgtat
aatacacgctccaagtttctgtcttcttccacttatcaggaaaatgcagaaaaggcgaag
atttctgaatgggttgcacatgataatgccatatttgacatatgttggattcaggaagac
agcaacatagtaacagcttcaggtgatcaaagtataaaggtatgggatgtaaaggaacag
aaatgtttaagagcattgatgggccatactggaagtgtgaaatccatttgtgttcatcct
acaaatcacaatgttattgtctccggttcaagagatgggtcctttgctctatgggatttg
aggtgcaatgacagcagtggccaaagactttgtctacaatcaattgctatggtgcatgag
gctcacatttctccttgtcaaaggcggggtagacgtagaaaggcttcttctatgagcatc
acatctgttctgcatctaaaggatgaggtctccatagctactgctggagcagttgacagt
gttataaagttttgggacacaaggagtctgaaatctcctatcagtcaggcatgccctcat
cctgaagggtcagctgagaaggaaagaaagctgcatggcatatctagtttatctcaagat
ttaaatggagtctttatctctgcatcttgcatggatagcagaatatacctatacaatgta
cttcagctagaacaagggccagtgaaaactttctctggatgccgaattgactcttttttt
gtgaagtcatcaataagccctgatgcagctcacatattaagcggctctagtgatgggaat
gcttacatatggcagataaggaaacctctagcagatcccattatactgaatagtcatgaa
ggagaagttacagcagtagattggtgcccatcggagacggggaaaatagcaacagcatca
gatgatttcacggctcgcatttggaacattcaaagcagttgttactccaacacaagatct
ccttcttccatccggaggggaataatggcgccttcaggcaaacaatgccggaagcttaat
ttatttcctgatgaaaaaccggattgctccaggaatgatttggacgttagctattcaccc
gtctcagaaataagtaccccggagtcccaaaaaagaaaatattcattgttgggatatgag
atgaaagacaagttggagaaaactcctgaagctacagcaaggagcccttcttctgttctg
aatcccccttcttcgttaaagagaagaacaatcagagattactttctgtcagcctcataa
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integrated database retrieval system